Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm3P21107 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Tpm3P21107 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.86■□□□□ 0.61
Tpm3P21107 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
Tpm3P21107 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.86■□□□□ 0.61
Tpm3P21107 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Tpm3P21107 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm3P21107 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm3P21107 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm3P21107 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm3P21107 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm3P21107 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm3P21107 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm3P21107 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm3P21107 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm3P21107 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm3P21107 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm3P21107 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Tpm3P21107 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.85■□□□□ 0.61
Tpm3P21107 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Tpm3P21107 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.85■□□□□ 0.61
Tpm3P21107 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm3P21107 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Tpm3P21107 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm3P21107 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm3P21107 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Tpm3P21107 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tpm3P21107 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Tpm3P21107 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm3P21107 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm3P21107 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm3P21107 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm3P21107 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm3P21107 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm3P21107 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.84■□□□□ 0.61
Tpm3P21107 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.84■□□□□ 0.61
Tpm3P21107 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm3P21107 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Tpm3P21107 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm3P21107 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.84■□□□□ 0.61
Tpm3P21107 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm3P21107 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.84■□□□□ 0.61
Tpm3P21107 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm3P21107 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm3P21107 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm3P21107 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Tpm3P21107 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm3P21107 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Tpm3P21107 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm3P21107 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm3P21107 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.84■□□□□ 0.61
Tpm3P21107 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm3P21107 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm3P21107 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Tpm3P21107 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm3P21107 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm3P21107 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm3P21107 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Tpm3P21107 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Tpm3P21107 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm3P21107 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm3P21107 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm3P21107 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Tpm3P21107 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm3P21107 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm3P21107 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Tpm3P21107 Gm13401-201ENSMUST00000117074 291 ntBASIC18.83■□□□□ 0.6
Tpm3P21107 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm3P21107 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Tpm3P21107 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.83■□□□□ 0.6
Tpm3P21107 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm3P21107 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm3P21107 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm3P21107 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm3P21107 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Tpm3P21107 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.6
Tpm3P21107 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm3P21107 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tpm3P21107 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm3P21107 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Tpm3P21107 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm3P21107 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm3P21107 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tpm3P21107 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Tpm3P21107 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.82■□□□□ 0.6
Tpm3P21107 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Tpm3P21107 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm3P21107 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC18.82■□□□□ 0.6
Tpm3P21107 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm3P21107 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.82■□□□□ 0.6
Tpm3P21107 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm3P21107 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm3P21107 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm3P21107 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm3P21107 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm3P21107 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm3P21107 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm3P21107 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm3P21107 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tpm3P21107 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms