Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UbbP0CG49 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UbbP0CG49 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
UbbP0CG49 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UbbP0CG49 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UbbP0CG49 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
UbbP0CG49 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UbbP0CG49 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UbbP0CG49 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UbbP0CG49 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.6□□□□□ -0.07
UbbP0CG49 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.6□□□□□ -0.07
UbbP0CG49 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.6□□□□□ -0.07
UbbP0CG49 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.6□□□□□ -0.07
UbbP0CG49 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
UbbP0CG49 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
UbbP0CG49 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UbbP0CG49 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
UbbP0CG49 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
UbbP0CG49 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
UbbP0CG49 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.59□□□□□ -0.07
UbbP0CG49 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.59□□□□□ -0.07
UbbP0CG49 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.59□□□□□ -0.07
UbbP0CG49 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.59□□□□□ -0.07
UbbP0CG49 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.59□□□□□ -0.07
UbbP0CG49 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UbbP0CG49 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
UbbP0CG49 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
UbbP0CG49 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
UbbP0CG49 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.58□□□□□ -0.08
UbbP0CG49 Gm4974-201ENSMUST00000209974 875 ntBASIC14.58□□□□□ -0.08
UbbP0CG49 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.58□□□□□ -0.08
UbbP0CG49 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UbbP0CG49 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UbbP0CG49 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UbbP0CG49 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.58□□□□□ -0.08
UbbP0CG49 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
UbbP0CG49 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
UbbP0CG49 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UbbP0CG49 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UbbP0CG49 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UbbP0CG49 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UbbP0CG49 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
UbbP0CG49 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
UbbP0CG49 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
UbbP0CG49 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
UbbP0CG49 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
UbbP0CG49 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
UbbP0CG49 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
UbbP0CG49 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Gm13158-201ENSMUST00000122007 736 ntBASIC14.57□□□□□ -0.08
UbbP0CG49 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.57□□□□□ -0.08
UbbP0CG49 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
UbbP0CG49 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
UbbP0CG49 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UbbP0CG49 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms