Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a1P02463 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.58■□□□□ 0.89
Col4a1P02463 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a1P02463 Gm25990-201ENSMUST00000102440 86 ntBASIC20.58■□□□□ 0.89
Col4a1P02463 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Col4a1P02463 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.58■□□□□ 0.89
Col4a1P02463 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a1P02463 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a1P02463 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Col4a1P02463 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a1P02463 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a1P02463 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.58■□□□□ 0.88
Col4a1P02463 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a1P02463 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a1P02463 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a1P02463 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a1P02463 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.58■□□□□ 0.88
Col4a1P02463 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a1P02463 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a1P02463 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a1P02463 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a1P02463 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a1P02463 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a1P02463 Gm1401-201ENSMUST00000122048 772 ntBASIC20.57■□□□□ 0.88
Col4a1P02463 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.57■□□□□ 0.88
Col4a1P02463 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a1P02463 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.56■□□□□ 0.88
Col4a1P02463 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Col4a1P02463 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.56■□□□□ 0.88
Col4a1P02463 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a1P02463 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a1P02463 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a1P02463 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a1P02463 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.56■□□□□ 0.88
Col4a1P02463 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.56■□□□□ 0.88
Col4a1P02463 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.56■□□□□ 0.88
Col4a1P02463 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Col4a1P02463 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Col4a1P02463 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Col4a1P02463 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.56■□□□□ 0.88
Col4a1P02463 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a1P02463 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Col4a1P02463 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a1P02463 Gm11779-201ENSMUST00000118541 368 ntBASIC20.55■□□□□ 0.88
Col4a1P02463 Gm13418-201ENSMUST00000119097 944 ntBASIC20.55■□□□□ 0.88
Col4a1P02463 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.55■□□□□ 0.88
Col4a1P02463 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.55■□□□□ 0.88
Col4a1P02463 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a1P02463 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Col4a1P02463 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a1P02463 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a1P02463 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Col4a1P02463 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a1P02463 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a1P02463 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a1P02463 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a1P02463 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a1P02463 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a1P02463 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.54■□□□□ 0.88
Col4a1P02463 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a1P02463 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a1P02463 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Col4a1P02463 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Col4a1P02463 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.54■□□□□ 0.88
Col4a1P02463 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.54■□□□□ 0.88
Col4a1P02463 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a1P02463 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a1P02463 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a1P02463 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Col4a1P02463 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a1P02463 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a1P02463 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a1P02463 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a1P02463 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Col4a1P02463 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a1P02463 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a1P02463 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.53■□□□□ 0.88
Col4a1P02463 Gm18195-201ENSMUST00000207604 706 ntBASIC20.53■□□□□ 0.88
Col4a1P02463 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a1P02463 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.53■□□□□ 0.88
Col4a1P02463 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a1P02463 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a1P02463 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a1P02463 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a1P02463 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Col4a1P02463 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Col4a1P02463 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a1P02463 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a1P02463 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a1P02463 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a1P02463 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.52■□□□□ 0.88
Col4a1P02463 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a1P02463 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.52■□□□□ 0.88
Col4a1P02463 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a1P02463 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a1P02463 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a1P02463 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col4a1P02463 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Col4a1P02463 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Col4a1P02463 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms