Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Gm12085-201ENSMUST00000119263 940 ntBASIC11.88□□□□□ -0.51
Sh2d1aO88890 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sh2d1aO88890 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2d1aO88890 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Sh2d1aO88890 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2d1aO88890 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Gm24841-201ENSMUST00000158676 357 ntBASIC11.86□□□□□ -0.51
Sh2d1aO88890 Gm27011-201ENSMUST00000182352 972 ntBASIC11.86□□□□□ -0.51
Sh2d1aO88890 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sh2d1aO88890 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Zkscan3-208ENSMUST00000224820 5398 ntBASIC11.85□□□□□ -0.51
Sh2d1aO88890 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Mir1199-201ENSMUST00000117015 119 ntBASIC11.85□□□□□ -0.51
Sh2d1aO88890 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh2d1aO88890 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms