Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cops6O88545 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.45■□□□□ 0.86
Cops6O88545 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cops6O88545 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cops6O88545 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC20.45■□□□□ 0.86
Cops6O88545 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cops6O88545 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.45■□□□□ 0.86
Cops6O88545 Gm13884-201ENSMUST00000118103 829 ntBASIC20.45■□□□□ 0.86
Cops6O88545 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.45■□□□□ 0.86
Cops6O88545 Mir8098-201ENSMUST00000184011 137 ntBASIC20.45■□□□□ 0.86
Cops6O88545 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cops6O88545 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cops6O88545 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.45■□□□□ 0.86
Cops6O88545 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cops6O88545 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cops6O88545 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
Cops6O88545 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Cops6O88545 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cops6O88545 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cops6O88545 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops6O88545 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cops6O88545 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cops6O88545 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops6O88545 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops6O88545 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops6O88545 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops6O88545 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops6O88545 Gm44430-201ENSMUST00000203376 995 ntBASIC20.44■□□□□ 0.86
Cops6O88545 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.44■□□□□ 0.86
Cops6O88545 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops6O88545 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops6O88545 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cops6O88545 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cops6O88545 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops6O88545 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cops6O88545 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.44■□□□□ 0.86
Cops6O88545 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cops6O88545 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cops6O88545 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cops6O88545 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cops6O88545 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cops6O88545 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cops6O88545 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cops6O88545 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cops6O88545 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cops6O88545 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cops6O88545 Rprl3-201ENSMUST00000157400 290 ntBASIC20.43■□□□□ 0.86
Cops6O88545 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cops6O88545 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cops6O88545 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cops6O88545 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cops6O88545 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cops6O88545 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cops6O88545 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cops6O88545 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cops6O88545 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cops6O88545 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cops6O88545 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cops6O88545 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cops6O88545 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cops6O88545 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cops6O88545 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cops6O88545 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cops6O88545 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cops6O88545 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cops6O88545 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Cops6O88545 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cops6O88545 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cops6O88545 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cops6O88545 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cops6O88545 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Cops6O88545 Gm12644-201ENSMUST00000119935 606 ntBASIC20.41■□□□□ 0.86
Cops6O88545 Gm11452-201ENSMUST00000122376 690 ntBASIC20.41■□□□□ 0.86
Cops6O88545 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.41■□□□□ 0.86
Cops6O88545 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.41■□□□□ 0.86
Cops6O88545 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.41■□□□□ 0.86
Cops6O88545 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.41■□□□□ 0.86
Cops6O88545 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Cops6O88545 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Cops6O88545 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.41■□□□□ 0.86
Cops6O88545 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cops6O88545 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cops6O88545 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cops6O88545 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cops6O88545 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cops6O88545 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cops6O88545 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Cops6O88545 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.4■□□□□ 0.86
Cops6O88545 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.4■□□□□ 0.86
Cops6O88545 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cops6O88545 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.4■□□□□ 0.86
Cops6O88545 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms