Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Efnb3O35393 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Efnb3O35393 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.29□□□□□ -0.28
Efnb3O35393 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Efnb3O35393 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Efnb3O35393 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
Efnb3O35393 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Efnb3O35393 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.28□□□□□ -0.28
Efnb3O35393 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Efnb3O35393 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.27□□□□□ -0.28
Efnb3O35393 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Efnb3O35393 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Efnb3O35393 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Efnb3O35393 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Efnb3O35393 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Efnb3O35393 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Efnb3O35393 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Efnb3O35393 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Efnb3O35393 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Efnb3O35393 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.27□□□□□ -0.29
Efnb3O35393 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.27□□□□□ -0.29
Efnb3O35393 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.27□□□□□ -0.29
Efnb3O35393 Mtag2-201ENSMUST00000058665 714 ntBASIC13.27□□□□□ -0.29
Efnb3O35393 Gm4968-201ENSMUST00000071458 858 ntBASIC13.27□□□□□ -0.29
Efnb3O35393 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Efnb3O35393 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Efnb3O35393 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.27□□□□□ -0.29
Efnb3O35393 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Efnb3O35393 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Efnb3O35393 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Efnb3O35393 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.27□□□□□ -0.29
Efnb3O35393 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Efnb3O35393 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Efnb3O35393 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Efnb3O35393 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Efnb3O35393 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Efnb3O35393 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Efnb3O35393 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.26□□□□□ -0.29
Efnb3O35393 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Efnb3O35393 Gm6576-201ENSMUST00000169678 883 ntBASIC13.26□□□□□ -0.29
Efnb3O35393 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.26□□□□□ -0.29
Efnb3O35393 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Efnb3O35393 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Efnb3O35393 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Efnb3O35393 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Efnb3O35393 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Efnb3O35393 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Efnb3O35393 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Efnb3O35393 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Efnb3O35393 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Efnb3O35393 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Efnb3O35393 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Efnb3O35393 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.25□□□□□ -0.29
Efnb3O35393 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Efnb3O35393 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Efnb3O35393 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Efnb3O35393 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms