Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Gm12896-201ENSMUST00000118430 226 ntBASIC17.24■□□□□ 0.35
Trove2O08848 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trove2O08848 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.23■□□□□ 0.35
Trove2O08848 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trove2O08848 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.23■□□□□ 0.35
Trove2O08848 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.23■□□□□ 0.35
Trove2O08848 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.23■□□□□ 0.35
Trove2O08848 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.23■□□□□ 0.35
Trove2O08848 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.23■□□□□ 0.35
Trove2O08848 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trove2O08848 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trove2O08848 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trove2O08848 Dio3-201ENSMUST00000097228 1449 ntBASIC17.22■□□□□ 0.35
Trove2O08848 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trove2O08848 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trove2O08848 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.22■□□□□ 0.35
Trove2O08848 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trove2O08848 Gm12441-201ENSMUST00000121806 588 ntBASIC17.22■□□□□ 0.35
Trove2O08848 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trove2O08848 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trove2O08848 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trove2O08848 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Trove2O08848 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trove2O08848 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trove2O08848 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trove2O08848 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trove2O08848 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trove2O08848 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trove2O08848 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.21■□□□□ 0.35
Trove2O08848 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trove2O08848 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trove2O08848 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trove2O08848 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trove2O08848 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trove2O08848 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.21■□□□□ 0.35
Trove2O08848 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trove2O08848 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.21■□□□□ 0.35
Trove2O08848 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.21■□□□□ 0.35
Trove2O08848 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.21■□□□□ 0.35
Trove2O08848 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trove2O08848 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trove2O08848 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trove2O08848 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trove2O08848 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.21■□□□□ 0.35
Trove2O08848 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trove2O08848 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trove2O08848 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.21■□□□□ 0.34
Trove2O08848 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trove2O08848 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Trove2O08848 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trove2O08848 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trove2O08848 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trove2O08848 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trove2O08848 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.2■□□□□ 0.34
Trove2O08848 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms