Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFRD1O00458 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFRD1O00458 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IFRD1O00458 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
IFRD1O00458 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IFRD1O00458 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
IFRD1O00458 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IFRD1O00458 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IFRD1O00458 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
IFRD1O00458 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 AL691432.2-201ENST00000607222 2038 ntBASIC19.3■□□□□ 0.68
IFRD1O00458 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.3■□□□□ 0.68
IFRD1O00458 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.3■□□□□ 0.68
IFRD1O00458 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
IFRD1O00458 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
IFRD1O00458 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
IFRD1O00458 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
IFRD1O00458 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
IFRD1O00458 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.3■□□□□ 0.68
IFRD1O00458 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
IFRD1O00458 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.3■□□□□ 0.68
IFRD1O00458 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.3■□□□□ 0.68
IFRD1O00458 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.3■□□□□ 0.68
IFRD1O00458 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
IFRD1O00458 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
IFRD1O00458 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.3■□□□□ 0.68
IFRD1O00458 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IFRD1O00458 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
IFRD1O00458 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.29■□□□□ 0.68
IFRD1O00458 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFRD1O00458 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.29■□□□□ 0.68
IFRD1O00458 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.29■□□□□ 0.68
IFRD1O00458 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.29■□□□□ 0.68
IFRD1O00458 TFP1-202ENST00000475455 1573 ntBASIC19.29■□□□□ 0.68
IFRD1O00458 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFRD1O00458 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.29■□□□□ 0.68
IFRD1O00458 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.29■□□□□ 0.68
IFRD1O00458 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.29■□□□□ 0.68
IFRD1O00458 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
IFRD1O00458 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.29■□□□□ 0.68
IFRD1O00458 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.29■□□□□ 0.68
IFRD1O00458 RPPH1-201ENST00000516869 333 ntBASIC19.29■□□□□ 0.68
IFRD1O00458 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.29■□□□□ 0.68
IFRD1O00458 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.29■□□□□ 0.68
IFRD1O00458 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.29■□□□□ 0.68
IFRD1O00458 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.29■□□□□ 0.68
IFRD1O00458 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFRD1O00458 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFRD1O00458 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.29■□□□□ 0.68
IFRD1O00458 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IFRD1O00458 AP006587.1-201ENST00000534129 1502 ntBASIC19.29■□□□□ 0.68
IFRD1O00458 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IFRD1O00458 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFRD1O00458 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFRD1O00458 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFRD1O00458 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFRD1O00458 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.28■□□□□ 0.68
IFRD1O00458 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.28■□□□□ 0.68
IFRD1O00458 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IFRD1O00458 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFRD1O00458 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
IFRD1O00458 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IFRD1O00458 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
IFRD1O00458 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFRD1O00458 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFRD1O00458 KRASP1-201ENST00000407852 552 ntBASIC19.28■□□□□ 0.68
IFRD1O00458 AL158047.1-201ENST00000445918 881 ntBASIC19.28■□□□□ 0.68
IFRD1O00458 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.28■□□□□ 0.68
IFRD1O00458 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.28■□□□□ 0.68
IFRD1O00458 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
IFRD1O00458 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.28■□□□□ 0.68
IFRD1O00458 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.28■□□□□ 0.68
IFRD1O00458 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.28■□□□□ 0.68
IFRD1O00458 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
IFRD1O00458 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFRD1O00458 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFRD1O00458 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
IFRD1O00458 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IFRD1O00458 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
IFRD1O00458 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
IFRD1O00458 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.27■□□□□ 0.68
IFRD1O00458 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IFRD1O00458 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.27■□□□□ 0.68
IFRD1O00458 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IFRD1O00458 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms