Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Ccdc141E9Q8Q6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Ccdc141E9Q8Q6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Ccdc141E9Q8Q6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ccdc141E9Q8Q6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ccdc141E9Q8Q6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ccdc141E9Q8Q6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ccdc141E9Q8Q6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Gm7063-201ENSMUST00000186840 981 ntBASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Gm5837-201ENSMUST00000191844 1369 ntBASIC25.17■■□□□ 1.62
Ccdc141E9Q8Q6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ccdc141E9Q8Q6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ccdc141E9Q8Q6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC25.16■■□□□ 1.62
Ccdc141E9Q8Q6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC25.16■■□□□ 1.62
Ccdc141E9Q8Q6 AC090659.1-201ENSMUST00000224334 768 ntBASIC25.16■■□□□ 1.62
Ccdc141E9Q8Q6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC25.15■■□□□ 1.62
Ccdc141E9Q8Q6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ccdc141E9Q8Q6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
Ccdc141E9Q8Q6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ccdc141E9Q8Q6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ccdc141E9Q8Q6 Gm3928-201ENSMUST00000121141 1307 ntBASIC25.14■■□□□ 1.62
Ccdc141E9Q8Q6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
Ccdc141E9Q8Q6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC25.14■■□□□ 1.62
Ccdc141E9Q8Q6 Gm9172-201ENSMUST00000212092 954 ntBASIC25.14■■□□□ 1.62
Ccdc141E9Q8Q6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ccdc141E9Q8Q6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ccdc141E9Q8Q6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ccdc141E9Q8Q6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.61
Ccdc141E9Q8Q6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Ccdc141E9Q8Q6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ccdc141E9Q8Q6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC25.13■■□□□ 1.61
Ccdc141E9Q8Q6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Ccdc141E9Q8Q6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
Ccdc141E9Q8Q6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ccdc141E9Q8Q6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ccdc141E9Q8Q6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC25.13■■□□□ 1.61
Ccdc141E9Q8Q6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Ccdc141E9Q8Q6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ccdc141E9Q8Q6 Auts2-212ENSMUST00000178555 309 ntBASIC25.12■■□□□ 1.61
Ccdc141E9Q8Q6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ccdc141E9Q8Q6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC25.12■■□□□ 1.61
Ccdc141E9Q8Q6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ccdc141E9Q8Q6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ccdc141E9Q8Q6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
Ccdc141E9Q8Q6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC25.12■■□□□ 1.61
Ccdc141E9Q8Q6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ccdc141E9Q8Q6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Ccdc141E9Q8Q6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC25.12■■□□□ 1.61
Ccdc141E9Q8Q6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC25.12■■□□□ 1.61
Ccdc141E9Q8Q6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC25.11■■□□□ 1.61
Ccdc141E9Q8Q6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ccdc141E9Q8Q6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ccdc141E9Q8Q6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ccdc141E9Q8Q6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ccdc141E9Q8Q6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ccdc141E9Q8Q6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Ccdc141E9Q8Q6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ccdc141E9Q8Q6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC25.11■■□□□ 1.61
Ccdc141E9Q8Q6 Gm10576-201ENSMUST00000191927 825 ntBASIC25.11■■□□□ 1.61
Ccdc141E9Q8Q6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Ccdc141E9Q8Q6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Ccdc141E9Q8Q6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Ccdc141E9Q8Q6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ccdc141E9Q8Q6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ccdc141E9Q8Q6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ccdc141E9Q8Q6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ccdc141E9Q8Q6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ccdc141E9Q8Q6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC25.1■■□□□ 1.61
Ccdc141E9Q8Q6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC25.1■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms