Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Igkv3-4A0A140T8Q4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gm42642-201ENSMUST00000200683 355 ntBASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Igkv3-4A0A140T8Q4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gm8839-201ENSMUST00000121279 1645 ntBASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gm5874-201ENSMUST00000096101 508 ntBASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC10.49□□□□□ -0.73
Igkv3-4A0A140T8Q4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Igkv3-4A0A140T8Q4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms