Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm11620-201ENSMUST00000118770 1845 ntBASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm27405-201ENSMUST00000184201 112 ntBASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm15375-201ENSMUST00000119510 849 ntBASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.57□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm13216-201ENSMUST00000117145 591 ntBASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Gm8495-201ENSMUST00000188740 694 ntBASIC11.56□□□□□ -0.56
Trav13d-4A0A0G2JFX3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms