Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.21□□□□□ -0.46
Trav9n-2A0A0G2JDP3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Gm18958-201ENSMUST00000174258 762 ntBASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9n-2A0A0G2JDP3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms