Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav7n-4A0A075B620 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7n-4A0A075B620 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7n-4A0A075B620 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7n-4A0A075B620 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav7n-4A0A075B620 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7n-4A0A075B620 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav7n-4A0A075B620 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Gm13401-201ENSMUST00000117074 291 ntBASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Gm38285-201ENSMUST00000192928 922 ntBASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7n-4A0A075B620 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav7n-4A0A075B620 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7n-4A0A075B620 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms