Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC012254.3-201ENST00000591183 2117 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 METTL21EP-201ENST00000298105 713 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 SNORD116-12-201ENST00000384468 92 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 RNU6-636P-201ENST00000384598 107 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 SNORD65C-201ENST00000390962 71 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 RNU4-22P-201ENST00000411058 166 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 RNA5SP498-201ENST00000411342 120 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AC245060.4-201ENST00000413293 1121 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AL035660.1-201ENST00000422041 222 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 OR6K4P-201ENST00000423179 955 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AC099677.3-201ENST00000427081 395 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AL050341.1-201ENST00000447743 313 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AL445466.1-201ENST00000448432 357 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 RPL5P23-201ENST00000496040 868 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AC082651.2-201ENST00000496833 166 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 ATP5LP3-201ENST00000514223 304 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 RNU6-1004P-201ENST00000516584 111 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 OR5AK3P-201ENST00000527486 1297 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AC023050.2-201ENST00000544968 387 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AC091515.1-201ENST00000548110 679 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 HMGN2P47-201ENST00000559378 272 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 ZNF322P1-201ENST00000568013 1209 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AP002884.5-201ENST00000595053 1132 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 MIR6809-201ENST00000612189 116 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AC010975.3-201ENST00000618727 978 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 MIR6719-201ENST00000622428 87 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AC011815.3-201ENST00000624194 473 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 IMMTP1-201ENST00000435590 2219 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AL121950.1-201ENST00000624993 2077 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 ZNF402P-201ENST00000404435 3100 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 AC130304.1-201ENST00000622942 2385 ntBASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB1Q9Y5F3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 AC106872.5-201ENST00000508856 1416 ntBASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 RNU1-150P-201ENST00000362491 162 ntBASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 RNU4-51P-201ENST00000364206 140 ntBASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 LRRC37BP1-201ENST00000398851 714 ntBASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 MTND4P13-201ENST00000402078 1023 ntBASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 AL391361.1-201ENST00000405580 489 ntBASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 USP9YP11-201ENST00000427537 717 ntBASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 AC073410.1-201ENST00000435125 589 ntBASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 RPS3AP38-201ENST00000435889 763 ntBASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 MYO5BP2-201ENST00000449815 1277 ntBASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 AL445665.1-202ENST00000452436 324 ntBASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 RPS6P2-201ENST00000454208 705 ntBASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHB1Q9Y5F3 PSMC1P13-201ENST00000458195 985 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms