Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC231533.2-201ENST00000419045 978 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 TEX41-204ENST00000423031 491 ntTSL 4 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 FTH1P10-202ENST00000430907 550 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC005040.1-201ENST00000437783 482 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 CDC42P2-201ENST00000448566 569 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AL513533.1-201ENST00000453728 415 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 MTND1P12-201ENST00000455231 147 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 VN1R6P-201ENST00000458417 907 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 SNORA35.1-201ENST00000458908 128 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC021660.1-201ENST00000465006 554 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 TUBBP11-201ENST00000472255 252 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 RN7SL751P-201ENST00000473281 284 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC117394.1-201ENST00000477323 567 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC093278.1-201ENST00000494700 600 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC106872.3-201ENST00000495104 446 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC243972.3-201ENST00000539655 198 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 FAM30C-201ENST00000561158 410 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 HMGN1P30-201ENST00000589286 268 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 OR7E19P-202ENST00000589942 844 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC006116.6-201ENST00000593258 1103 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AL133338.2-201ENST00000604292 736 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AL359999.1-201ENST00000604513 294 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC008121.3-201ENST00000618726 433 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC090527.3-201ENST00000619041 548 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC063952.1-203ENST00000634410 658 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC233280.20-201ENST00000637412 416 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AC010928.1-201ENST00000592477 1447 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 PRNCR1-201ENST00000635449 12727 ntBASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDHB11Q9Y5F2 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 OR2A20P-201ENST00000479887 2913 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 OR11H4-201ENST00000315409 1082 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 RN7SKP63-201ENST00000363187 301 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 RNA5SP396-201ENST00000364834 120 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 OR52E6-202ENST00000379946 954 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 RN7SKP131-201ENST00000410698 301 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AL359704.1-201ENST00000411586 781 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 CBX1P3-201ENST00000413296 527 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AL353193.1-201ENST00000421444 268 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 DYNLL1P7-201ENST00000429273 258 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AC018644.1-201ENST00000429934 551 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AC244505.2-201ENST00000435089 759 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 RPL7P54-201ENST00000438336 674 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AL451074.4-201ENST00000447545 470 ntBASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDHB11Q9Y5F2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms