Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 ANAPC10P1-201ENST00000395991 556 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 RNU4-34P-201ENST00000410431 124 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 RMRPP5-201ENST00000411156 267 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 BX284632.2-201ENST00000421091 399 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AL034379.1-201ENST00000423216 253 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 CRIP1P1-201ENST00000427567 185 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 FRG2FP-204ENST00000453982 852 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AL139824.2-201ENST00000458731 1095 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AL122020.1-201ENST00000472287 459 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 RPL38P3-201ENST00000484463 213 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 PDCL3P4-201ENST00000489621 720 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 SUMO2P5-201ENST00000506790 245 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AC109481.1-201ENST00000509173 282 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AC108043.1-201ENST00000512696 574 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 RNA5SP34-201ENST00000516887 130 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 FTH1P11-201ENST00000517577 551 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AP001207.2-201ENST00000519490 539 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AC034205.1-201ENST00000520621 638 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AC136777.2-201ENST00000522979 358 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AP000648.1-201ENST00000529682 397 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AC008126.1-201ENST00000549019 480 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AC044860.2-201ENST00000561005 179 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AL513327.3-201ENST00000602618 469 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AL031601.1-201ENST00000605702 394 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 BNIP3P41-202ENST00000616656 861 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 RPL23AP61-201ENST00000623642 466 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AC138965.3-201ENST00000623875 498 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AC092159.4-201ENST00000624944 550 ntBASIC5.59□□□□□ -1.51
VPS4AQ9UN37 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS4AQ9UN37 GNL2P1-201ENST00000451274 2190 ntBASIC5.59□□□□□ -1.52
VPS4AQ9UN37 AC079298.1-201ENST00000625026 1619 ntBASIC5.59□□□□□ -1.52
VPS4AQ9UN37 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.52
VPS4AQ9UN37 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
VPS4AQ9UN37 ADAM24P-201ENST00000398655 2101 ntBASIC5.59□□□□□ -1.52
VPS4AQ9UN37 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC005005.4-201ENST00000623789 16698 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 RBMY1HP-201ENST00000382759 1389 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 MIR375-201ENST00000362103 64 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 RNU6-481P-201ENST00000384194 107 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AL096711.1-201ENST00000404780 554 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 RPL26P37-201ENST00000411983 438 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AP000534.2-201ENST00000412729 568 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 GNG5P5-201ENST00000420444 220 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 MTCO1P43-201ENST00000431831 488 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC096775.1-201ENST00000437724 448 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 VN1R110P-201ENST00000438988 971 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 ARF4P4-201ENST00000439608 520 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AL512605.1-202ENST00000441919 381 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 RPS7P3-201ENST00000443360 580 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AP000281.1-201ENST00000444036 316 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AL359955.2-201ENST00000445380 353 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AL009048.1-201ENST00000450437 298 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 RNU1-88P-201ENST00000459274 128 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 RN7SL72P-201ENST00000460697 269 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC068587.2-201ENST00000478386 781 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC008629.2-201ENST00000503783 483 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 OR5M14P-201ENST00000506803 618 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 RN7SKP265-201ENST00000516448 223 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 MIR2117-201ENST00000516780 80 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC084824.2-201ENST00000548906 345 ntBASIC5.58□□□□□ -1.52
VPS4AQ9UN37 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS4AQ9UN37 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms