Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 IGBP1P1-201ENST00000554337 1009 ntBASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 AL845552.1-201ENST00000556820 323 ntBASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 MRPS21P7-201ENST00000566937 238 ntBASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 AC020915.5-201ENST00000596836 964 ntBASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 BMS1P7-201ENST00000602440 1052 ntBASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 MTCO2P22-201ENST00000603246 681 ntBASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 PPATP2-201ENST00000605635 508 ntBASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 AC129778.1-202ENST00000623812 261 ntBASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 AL591379.1-207ENST00000635982 261 ntBASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 AMYH02020865.1-205ENST00000636189 261 ntBASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 AC008691.1-209ENST00000642094 814 ntBASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SND1-IT1Q9HBX3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 HSPD1P11-201ENST00000508643 1702 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 PHKBP1-201ENST00000450951 1951 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 RNU4-44P-201ENST00000363050 141 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 RNU1-65P-201ENST00000363919 148 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 RN7SKP224-201ENST00000364140 325 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 SUGT1P2-201ENST00000379452 992 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AL034374.1-201ENST00000406329 351 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 Z68694.1-201ENST00000413929 841 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AL355994.1-201ENST00000424379 260 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 HMGB1P32-201ENST00000425971 565 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 MTCO1P45-201ENST00000431457 267 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AL353597.2-202ENST00000434901 373 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AL512637.1-201ENST00000439523 1231 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC005297.1-201ENST00000444765 862 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AL450996.1-201ENST00000445574 1202 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 VN1R48P-201ENST00000448149 1036 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AL354710.1-201ENST00000453641 246 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC093166.2-201ENST00000455969 1017 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 RN7SL189P-201ENST00000468631 289 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC021205.1-201ENST00000468797 348 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 ATG10-AS1-201ENST00000504846 648 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 BTG4P1-201ENST00000510421 183 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC027369.2-201ENST00000528030 440 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 DPRXP4-201ENST00000578053 568 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC233702.9-201ENST00000581528 203 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC011626.1-201ENST00000604710 562 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AL139407.1-201ENST00000613826 1175 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 MIR6737-201ENST00000617385 70 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 AC090017.1-201ENST00000548612 1779 ntBASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
SND1-IT1Q9HBX3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
SND1-IT1Q9HBX3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SND1-IT1Q9HBX3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SND1-IT1Q9HBX3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SND1-IT1Q9HBX3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
SND1-IT1Q9HBX3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC114786.1-201ENST00000512892 1415 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms