Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC034244.2-201ENST00000514668 858 ntBASIC5.65□□□□□ -1.5
EBF3Q9H4W6 RNU6-941P-201ENST00000516346 108 ntBASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC022832.1-201ENST00000530718 645 ntBASIC5.65□□□□□ -1.5
EBF3Q9H4W6 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC084824.2-201ENST00000548906 345 ntBASIC5.65□□□□□ -1.5
EBF3Q9H4W6 CD24P2-201ENST00000565486 219 ntBASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC087763.1-201ENST00000603391 286 ntBASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC025811.1-201ENST00000604312 472 ntBASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.65□□□□□ -1.5
EBF3Q9H4W6 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.65□□□□□ -1.5
EBF3Q9H4W6 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC109583.2-201ENST00000617367 129 ntBASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.65□□□□□ -1.5
EBF3Q9H4W6 AC138965.3-201ENST00000623875 498 ntBASIC5.65□□□□□ -1.5
EBF3Q9H4W6 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
EBF3Q9H4W6 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
EBF3Q9H4W6 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
EBF3Q9H4W6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
EBF3Q9H4W6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.65□□□□□ -1.51
EBF3Q9H4W6 AC007938.2-201ENST00000604666 2634 ntBASIC5.65□□□□□ -1.51
EBF3Q9H4W6 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
EBF3Q9H4W6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.65□□□□□ -1.51
EBF3Q9H4W6 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.65□□□□□ -1.51
EBF3Q9H4W6 TCP11X1-202ENST00000622971 1372 ntBASIC5.65□□□□□ -1.51
EBF3Q9H4W6 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
EBF3Q9H4W6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.65□□□□□ -1.51
EBF3Q9H4W6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
EBF3Q9H4W6 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
EBF3Q9H4W6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
EBF3Q9H4W6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 RNU1-43P-201ENST00000365052 165 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 SNORA70.6-201ENST00000383934 134 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 TRAV35-201ENST00000390462 330 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 RNU1-149P-201ENST00000390870 161 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AL358178.1-201ENST00000407698 397 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 VN1R37P-201ENST00000419096 748 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AC007161.1-204ENST00000423039 460 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AL590762.4-201ENST00000425885 253 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AL445528.1-201ENST00000426330 420 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 GSTM5P1-201ENST00000434751 660 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 NANOGP9-201ENST00000439890 892 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AC099063.2-201ENST00000446360 662 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 MTND1P31-201ENST00000449206 961 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 GAPDHP14-201ENST00000450472 937 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 OR6C72P-201ENST00000451403 892 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AL645937.3-201ENST00000453647 936 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 EIF2S2P4-201ENST00000461070 984 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AC092902.1-201ENST00000486999 259 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 SCARNA16.4-201ENST00000516956 187 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 RNA5SP230-201ENST00000517039 122 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AC134349.2-201ENST00000535136 910 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AC090888.2-201ENST00000559765 1144 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AC005412.1-201ENST00000580812 1049 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AP002884.5-201ENST00000595053 1132 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AC009974.1-201ENST00000608881 455 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AL157392.4-201ENST00000609756 345 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.64□□□□□ -1.51
EBF3Q9H4W6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
EBF3Q9H4W6 AC092376.2-201ENST00000622621 4116 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 ZNF733P-202ENST00000444809 1573 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 THAP12P8-201ENST00000447914 2115 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 313 ms