Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 RN7SKP16-201ENST00000410180 299 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 RPL34P6-201ENST00000432390 345 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 LINC02210-201ENST00000444561 288 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AC026726.1-201ENST00000512859 601 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 OR8A2P-201ENST00000528631 952 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 MIR3138-201ENST00000585238 82 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 ARF4P1-201ENST00000605447 541 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 DNAJA1P3-201ENST00000399417 1194 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 RPL23AP93-201ENST00000440847 484 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 OR7E125P-201ENST00000443450 846 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 CYCSP34-201ENST00000458172 304 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 RPS24P16-201ENST00000497294 392 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AC011477.5-201ENST00000586571 259 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AL356608.1-201ENST00000610034 820 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AC125336.1-201ENST00000508893 2827 ntBASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
ALMS1Q8TCU4 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 AL354766.1-201ENST00000423396 542 ntBASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 NDUFB4P8-201ENST00000435351 367 ntBASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
ALMS1Q8TCU4 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 GAPDHP62-201ENST00000515313 990 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 RN7SL176P-201ENST00000580352 264 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 SNX18P1Y-201ENST00000616231 511 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AP001153.1-201ENST00000641024 338 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 RN7SKP280-201ENST00000364196 304 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 RNA5SP317-201ENST00000410176 116 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 RNA5SP311-201ENST00000411290 116 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 SCARNA10-201ENST00000459255 330 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 RN7SL441P-201ENST00000492388 296 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 RNA5SP315-201ENST00000516340 116 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 SNORA67.7-201ENST00000516664 135 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 RNA5SP312-201ENST00000517068 116 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 MIR3939-201ENST00000582614 106 ntBASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 CR1-203ENST00000367051 7469 ntTSL 5 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 CR1-204ENST00000367052 7469 ntTSL 5 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 CR1-205ENST00000367053 7469 ntTSL 5 BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ALMS1Q8TCU4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms