Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 SNORA21-201ENST00000362423 132 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 RNU6-236P-201ENST00000363886 106 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 RNA5SP211-201ENST00000365516 117 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 RNU6-636P-201ENST00000384598 107 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 Y_RNA.578-201ENST00000390903 88 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC104297.1-201ENST00000393779 870 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC119751.3-201ENST00000399720 670 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 RN7SKP279-201ENST00000411383 298 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 SLC20A1P1-201ENST00000413906 956 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 RPL35AP31-201ENST00000418340 337 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 RPS3AP37-201ENST00000419176 745 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 RPL12P12-201ENST00000424633 501 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 RPS4XP16-201ENST00000427198 791 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 NPM1P18-201ENST00000434232 732 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 PTGES3P1-201ENST00000439531 483 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC073052.1-201ENST00000440417 714 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AL663074.2-201ENST00000440621 479 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 OR6K5P-201ENST00000447050 945 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC016027.4-201ENST00000450866 277 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC104164.1-201ENST00000460282 590 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 RN7SL552P-201ENST00000462094 276 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AL157777.1-201ENST00000468100 304 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 RPL38P3-201ENST00000484463 213 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC011411.1-201ENST00000509592 876 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC008837.1-201ENST00000511513 412 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC074087.1-201ENST00000512059 724 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 RNA5SP303-201ENST00000516192 130 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 HIGD1AP18-201ENST00000520730 278 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 OSBPL9P5-201ENST00000542581 171 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AL049870.4-201ENST00000555741 486 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC021171.1-201ENST00000603137 706 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AL139344.1-201ENST00000605228 195 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AP004607.9-201ENST00000618202 316 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AL445670.1-201ENST00000618889 801 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AP003399.1-201ENST00000637534 361 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC117409.1-201ENST00000470499 1310 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 RBMY1HP-201ENST00000382759 1389 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 MTCO1P18-201ENST00000455518 1419 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AL031595.2-201ENST00000624215 19071 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 AC026523.2-201ENST00000625039 7739 ntBASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.36□□□□□ -1.55
PTCHD4Q6ZW05 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 TRIM51GP-201ENST00000534741 1350 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 MIR142-201ENST00000384835 87 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 MIR188-201ENST00000385034 86 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 MT-TP-201ENST00000387461 68 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AL132875.1-201ENST00000403623 949 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 HSPE1P16-201ENST00000426640 348 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AC099677.3-201ENST00000427081 395 ntBASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.35□□□□□ -1.55
PTCHD4Q6ZW05 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms