Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CEACAMP7-201ENST00000444105 496 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 AC016772.1-201ENST00000444170 1261 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 DNAJB5P1-201ENST00000454004 806 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 RN7SL610P-201ENST00000463845 291 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 AP000797.2-201ENST00000475768 606 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 AC020779.1-201ENST00000478757 796 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 RPS24P16-201ENST00000497294 392 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 NIFKP7-201ENST00000503365 834 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 AC013701.1-201ENST00000522657 465 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 AC011447.4-201ENST00000587562 111 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 AC118658.2-201ENST00000618697 459 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 AC068870.2-201ENST00000620635 389 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 AP002799.1-201ENST00000623552 423 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 HSPA8P18-201ENST00000439846 1928 ntBASIC5.33□□□□□ -1.56
RFWD3Q6PCD5 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 RNA5SP455-201ENST00000365190 119 ntBASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 RNU1-74P-201ENST00000384108 171 ntBASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 OTX2P1-201ENST00000450956 354 ntBASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 AC133644.2-201ENST00000608142 540 ntBASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 MIR6839-201ENST00000620425 113 ntBASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 CASC19-222ENST00000641321 1173 ntBASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 AC138627.1-204ENST00000641894 765 ntBASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 AC073869.10-201ENST00000642016 354 ntBASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RFWD3Q6PCD5 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 AC022417.1-201ENST00000624768 1303 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 UBBP2-201ENST00000376781 231 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 AL589647.1-201ENST00000402485 466 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 RN7SKP16-201ENST00000410180 299 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 RN7SKP114-201ENST00000410327 279 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 RANP7-201ENST00000418085 644 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 RBMY2QP-201ENST00000429799 1147 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 TPTE2P1-204ENST00000435256 593 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 RPL12P3-201ENST00000440080 396 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 AC097484.1-201ENST00000471148 389 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 RPL5P16-201ENST00000471467 790 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 BNIP3P35-201ENST00000604530 490 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 AL451049.1-201ENST00000608672 497 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 AC093799.2-201ENST00000610062 578 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 OR8G7P-201ENST00000616658 848 ntBASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.31□□□□□ -1.56
RFWD3Q6PCD5 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms