Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AP000346.3-201ENST00000622821 210 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC006840.1-201ENST00000623069 542 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC006210.2-201ENST00000367074 1545 ntBASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 AP002530.1-201ENST00000405705 684 ntBASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 FAR2P2-201ENST00000413041 594 ntBASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 FAR2P4-202ENST00000425399 584 ntBASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 RPL5P25-201ENST00000441148 775 ntBASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 RPS12P31-201ENST00000491419 398 ntBASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 RN7SL244P-201ENST00000493405 297 ntBASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 OR8Q1P-201ENST00000526467 655 ntBASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 AC063949.1-201ENST00000552900 865 ntBASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 AC068790.4-201ENST00000602474 263 ntBASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 MIR378J-201ENST00000611988 109 ntBASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 AL137141.1-201ENST00000624622 4836 ntBASIC5.94□□□□□ -1.46
SHROOM1Q2M3G4 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 AC109446.4-201ENST00000623235 2755 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 RNU6-398P-201ENST00000384143 109 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 AL356968.2-201ENST00000412769 1257 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 PRPF38AP2-201ENST00000438179 851 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 AC073648.4-201ENST00000442655 781 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 MED28P3-201ENST00000444288 531 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 RN7SL319P-201ENST00000480656 221 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 AC111000.6-201ENST00000514471 709 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 RFPL4AP3-201ENST00000515267 345 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 AC136777.2-201ENST00000522979 358 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 EIF1P5-201ENST00000585002 234 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 AC015849.6-201ENST00000605454 474 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 AC093775.1-201ENST00000624154 1868 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 HCFC2P1-201ENST00000392864 1592 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 SAMMSON-226ENST00000642089 1582 ntBASIC5.93□□□□□ -1.46
SHROOM1Q2M3G4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms