Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.31□□□□□ -1.56
RPS3AP61247 ADAM5-202ENST00000399789 1942 ntBASIC5.31□□□□□ -1.56
RPS3AP61247 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPS3AP61247 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPS3AP61247 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RPS3AP61247 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.3□□□□□ -1.56
RPS3AP61247 AC104964.3-201ENST00000606115 2860 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.3□□□□□ -1.56
RPS3AP61247 AC093311.1-201ENST00000506586 2021 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RPS3AP61247 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPS3AP61247 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPS3AP61247 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RPS3AP61247 TMSB4XP2-201ENST00000335179 210 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 RNU1-146P-201ENST00000364015 165 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 RN7SKP15-201ENST00000364742 309 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPS3AP61247 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RPS3AP61247 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RPS3AP61247 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPS3AP61247 AL096711.1-201ENST00000404780 554 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 SNORA11.3-201ENST00000408471 128 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 LINC01347-201ENST00000417964 355 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 MTCO3P4-201ENST00000419236 787 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 AC113412.1-201ENST00000425840 504 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.3□□□□□ -1.56
RPS3AP61247 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.3□□□□□ -1.56
RPS3AP61247 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.3□□□□□ -1.56
RPS3AP61247 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.3□□□□□ -1.56
RPS3AP61247 AL158053.1-201ENST00000441503 453 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 AC023141.8-201ENST00000442554 208 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 AC097499.1-201ENST00000444277 208 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.3□□□□□ -1.56
RPS3AP61247 CASP3P1-201ENST00000446037 609 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 NPM1P39-201ENST00000449818 867 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 RPL7AP52-201ENST00000458096 790 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 RPL7P48-201ENST00000461513 746 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.3□□□□□ -1.56
RPS3AP61247 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.3□□□□□ -1.56
RPS3AP61247 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.3□□□□□ -1.56
RPS3AP61247 MTND3P3-201ENST00000505004 126 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RPS3AP61247 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.3□□□□□ -1.56
RPS3AP61247 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
RPS3AP61247 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.3□□□□□ -1.56
RPS3AP61247 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.3□□□□□ -1.56
RPS3AP61247 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.3□□□□□ -1.56
RPS3AP61247 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.3□□□□□ -1.56
RPS3AP61247 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.3□□□□□ -1.56
RPS3AP61247 AL356801.1-201ENST00000559320 294 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.3□□□□□ -1.56
RPS3AP61247 MIR548Y-201ENST00000582739 110 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.3□□□□□ -1.56
RPS3AP61247 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.3□□□□□ -1.56
RPS3AP61247 ABI1P1-201ENST00000603375 1120 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 AC100767.2-201ENST00000604840 693 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 AC011374.2-201ENST00000607135 526 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 AC023813.4-201ENST00000607580 580 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 AC112503.2-201ENST00000609005 552 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.3□□□□□ -1.56
RPS3AP61247 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.3□□□□□ -1.56
RPS3AP61247 SNORA11.6-201ENST00000619030 128 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 AC027228.2-201ENST00000567141 2154 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RPS3AP61247 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPS3AP61247 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RPS3AP61247 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RPS3AP61247 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RPS3AP61247 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.3□□□□□ -1.56
RPS3AP61247 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RPS3AP61247 AC083899.1-201ENST00000454465 3819 ntBASIC5.3□□□□□ -1.56
RPS3AP61247 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RPS3AP61247 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RPS3AP61247 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.29□□□□□ -1.56
RPS3AP61247 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPS3AP61247 AL136520.1-201ENST00000600311 1322 ntBASIC5.29□□□□□ -1.56
RPS3AP61247 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RPS3AP61247 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPS3AP61247 AP001642.1-201ENST00000624727 2117 ntBASIC5.29□□□□□ -1.56
RPS3AP61247 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.29□□□□□ -1.56
RPS3AP61247 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
RPS3AP61247 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.29□□□□□ -1.56
RPS3AP61247 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPS3AP61247 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RPS3AP61247 OR52B3P-201ENST00000314715 928 ntBASIC5.29□□□□□ -1.56
RPS3AP61247 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RPS3AP61247 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RPS3AP61247 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPS3AP61247 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPS3AP61247 GCNT6-201ENST00000379591 934 ntBASIC5.29□□□□□ -1.56
RPS3AP61247 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.29□□□□□ -1.56
RPS3AP61247 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPS3AP61247 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
RPS3AP61247 MIR142-201ENST00000384835 87 ntBASIC5.29□□□□□ -1.56
RPS3AP61247 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.29□□□□□ -1.56
RPS3AP61247 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.29□□□□□ -1.56
RPS3AP61247 MTCO3P21-201ENST00000430791 643 ntBASIC5.29□□□□□ -1.56
RPS3AP61247 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RPS3AP61247 RPL6P5-201ENST00000445678 828 ntBASIC5.29□□□□□ -1.56
RPS3AP61247 AP006222.1-205ENST00000450734 457 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms