Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC011755.1-201ENST00000623763 2049 ntBASIC4.9□□□□□ -1.62
VSX2P58304 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VSX2P58304 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.9□□□□□ -1.62
VSX2P58304 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
VSX2P58304 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.9□□□□□ -1.62
VSX2P58304 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
VSX2P58304 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.9□□□□□ -1.62
VSX2P58304 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
VSX2P58304 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VSX2P58304 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
VSX2P58304 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VSX2P58304 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
VSX2P58304 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.9□□□□□ -1.62
VSX2P58304 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VSX2P58304 RNA5SP305-201ENST00000362665 119 ntBASIC4.9□□□□□ -1.63
VSX2P58304 RNU4-4P-201ENST00000364588 130 ntBASIC4.9□□□□□ -1.63
VSX2P58304 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.9□□□□□ -1.63
VSX2P58304 SMC4P1-201ENST00000414479 527 ntBASIC4.9□□□□□ -1.63
VSX2P58304 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
VSX2P58304 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.9□□□□□ -1.63
VSX2P58304 HSPD1P12-201ENST00000429127 1069 ntBASIC4.9□□□□□ -1.63
VSX2P58304 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.9□□□□□ -1.63
VSX2P58304 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.9□□□□□ -1.63
VSX2P58304 SBDSP1-204ENST00000453858 737 ntBASIC4.9□□□□□ -1.63
VSX2P58304 RN7SL443P-201ENST00000464331 290 ntBASIC4.9□□□□□ -1.63
VSX2P58304 AC090589.1-201ENST00000473109 362 ntBASIC4.9□□□□□ -1.63
VSX2P58304 AC093270.2-201ENST00000486157 792 ntBASIC4.9□□□□□ -1.63
VSX2P58304 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.9□□□□□ -1.63
VSX2P58304 KATNBL1P4-201ENST00000503545 918 ntBASIC4.9□□□□□ -1.63
VSX2P58304 AC097173.1-201ENST00000505862 819 ntBASIC4.9□□□□□ -1.63
VSX2P58304 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.9□□□□□ -1.63
VSX2P58304 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.9□□□□□ -1.63
VSX2P58304 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
VSX2P58304 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.9□□□□□ -1.63
VSX2P58304 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
VSX2P58304 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.9□□□□□ -1.63
VSX2P58304 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.9□□□□□ -1.63
VSX2P58304 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.9□□□□□ -1.63
VSX2P58304 AC107993.1-201ENST00000591343 684 ntBASIC4.9□□□□□ -1.63
VSX2P58304 AL122125.1-201ENST00000616999 600 ntBASIC4.9□□□□□ -1.63
VSX2P58304 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
VSX2P58304 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VSX2P58304 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
VSX2P58304 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VSX2P58304 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
VSX2P58304 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VSX2P58304 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VSX2P58304 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.89□□□□□ -1.63
VSX2P58304 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.89□□□□□ -1.63
VSX2P58304 THAP12P4-201ENST00000528321 2266 ntBASIC4.89□□□□□ -1.63
VSX2P58304 MTCO1P46-201ENST00000451639 1491 ntBASIC4.89□□□□□ -1.63
VSX2P58304 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VSX2P58304 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.89□□□□□ -1.63
VSX2P58304 RNA5SP296-201ENST00000410523 111 ntBASIC4.89□□□□□ -1.63
VSX2P58304 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.89□□□□□ -1.63
VSX2P58304 RPS27P18-201ENST00000431701 247 ntBASIC4.89□□□□□ -1.63
VSX2P58304 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.89□□□□□ -1.63
VSX2P58304 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.89□□□□□ -1.63
VSX2P58304 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.89□□□□□ -1.63
VSX2P58304 snoU13.20-201ENST00000459180 104 ntBASIC4.89□□□□□ -1.63
VSX2P58304 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VSX2P58304 RPL5P22-201ENST00000480199 884 ntBASIC4.89□□□□□ -1.63
VSX2P58304 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
VSX2P58304 HMGN2P25-201ENST00000486956 268 ntBASIC4.89□□□□□ -1.63
VSX2P58304 AC069304.1-201ENST00000491593 704 ntBASIC4.89□□□□□ -1.63
VSX2P58304 ENPP7P11-201ENST00000505915 627 ntBASIC4.89□□□□□ -1.63
VSX2P58304 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.89□□□□□ -1.63
VSX2P58304 RNU6-1334P-201ENST00000516032 105 ntBASIC4.89□□□□□ -1.63
VSX2P58304 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.89□□□□□ -1.63
VSX2P58304 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.89□□□□□ -1.63
VSX2P58304 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.89□□□□□ -1.63
VSX2P58304 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.89□□□□□ -1.63
VSX2P58304 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.89□□□□□ -1.63
VSX2P58304 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.89□□□□□ -1.63
VSX2P58304 AC093799.2-201ENST00000610062 578 ntBASIC4.89□□□□□ -1.63
VSX2P58304 AC068870.2-201ENST00000620635 389 ntBASIC4.89□□□□□ -1.63
VSX2P58304 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VSX2P58304 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.89□□□□□ -1.63
VSX2P58304 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VSX2P58304 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VSX2P58304 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VSX2P58304 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VSX2P58304 SMG1P4-204ENST00000523028 4131 ntBASIC4.89□□□□□ -1.63
VSX2P58304 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VSX2P58304 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.89□□□□□ -1.63
VSX2P58304 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
VSX2P58304 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VSX2P58304 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VSX2P58304 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VSX2P58304 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.88□□□□□ -1.63
VSX2P58304 AC053481.2-202ENST00000582394 1500 ntBASIC4.88□□□□□ -1.63
VSX2P58304 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VSX2P58304 RN7SKP113-201ENST00000363891 295 ntBASIC4.88□□□□□ -1.63
VSX2P58304 AL353625.1-202ENST00000366273 571 ntBASIC4.88□□□□□ -1.63
VSX2P58304 AL050305.1-201ENST00000399993 1230 ntBASIC4.88□□□□□ -1.63
VSX2P58304 AL390316.1-201ENST00000406279 553 ntBASIC4.88□□□□□ -1.63
VSX2P58304 CTSL3P-202ENST00000412179 788 ntBASIC4.88□□□□□ -1.63
VSX2P58304 GJA6P-201ENST00000415117 1042 ntBASIC4.88□□□□□ -1.63
VSX2P58304 DDX39BP1-205ENST00000422507 192 ntBASIC4.88□□□□□ -1.63
VSX2P58304 NPM1P22-201ENST00000427761 952 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms