Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CLDN6P56747 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.61
CLDN6P56747 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLDN6P56747 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.61
CLDN6P56747 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
CLDN6P56747 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLDN6P56747 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN6P56747 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN6P56747 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN6P56747 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN6P56747 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CLDN6P56747 AC026951.1-201ENST00000559530 2459 ntBASIC4.96□□□□□ -1.62
CLDN6P56747 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN6P56747 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN6P56747 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN6P56747 RNA5SP90-201ENST00000364801 99 ntBASIC4.96□□□□□ -1.62
CLDN6P56747 RN7SKP186-201ENST00000365371 303 ntBASIC4.96□□□□□ -1.62
CLDN6P56747 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN6P56747 SNORA5.1-201ENST00000384275 131 ntBASIC4.96□□□□□ -1.62
CLDN6P56747 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN6P56747 NPM1P40-201ENST00000412758 733 ntBASIC4.96□□□□□ -1.62
CLDN6P56747 AC068287.1-201ENST00000430283 295 ntBASIC4.96□□□□□ -1.62
CLDN6P56747 NPM1P18-201ENST00000434232 732 ntBASIC4.96□□□□□ -1.62
CLDN6P56747 RPS29P10-201ENST00000439197 166 ntBASIC4.96□□□□□ -1.62
CLDN6P56747 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN6P56747 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN6P56747 MED28P3-201ENST00000444288 531 ntBASIC4.96□□□□□ -1.62
CLDN6P56747 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN6P56747 OR52J1P-201ENST00000450596 932 ntBASIC4.96□□□□□ -1.62
CLDN6P56747 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CLDN6P56747 AC114982.2-201ENST00000461396 358 ntBASIC4.96□□□□□ -1.62
CLDN6P56747 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN6P56747 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN6P56747 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN6P56747 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN6P56747 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.96□□□□□ -1.62
CLDN6P56747 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.96□□□□□ -1.62
CLDN6P56747 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN6P56747 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN6P56747 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.96□□□□□ -1.62
CLDN6P56747 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN6P56747 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN6P56747 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN6P56747 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN6P56747 AC105254.2-201ENST00000603636 436 ntBASIC4.96□□□□□ -1.62
CLDN6P56747 AC007786.3-201ENST00000615154 596 ntBASIC4.96□□□□□ -1.62
CLDN6P56747 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
CLDN6P56747 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN6P56747 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN6P56747 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN6P56747 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN6P56747 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN6P56747 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN6P56747 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN6P56747 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN6P56747 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN6P56747 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN6P56747 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN6P56747 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.95□□□□□ -1.62
CLDN6P56747 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CLDN6P56747 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN6P56747 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CLDN6P56747 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN6P56747 AC079741.1-201ENST00000321498 212 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 NPM1P37-201ENST00000403105 874 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 RPL10P10-201ENST00000403509 664 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 RNU2-50P-201ENST00000410494 143 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 DDX39BP1-205ENST00000422507 192 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.95□□□□□ -1.62
CLDN6P56747 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.95□□□□□ -1.62
CLDN6P56747 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.95□□□□□ -1.62
CLDN6P56747 AC103987.1-201ENST00000473394 348 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 AL161747.1-201ENST00000480068 358 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 AC068587.1-201ENST00000483613 781 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.95□□□□□ -1.62
CLDN6P56747 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.95□□□□□ -1.62
CLDN6P56747 RN7SKP260-201ENST00000516907 149 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 MORF4L1P3-201ENST00000525966 950 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 OR7E128P-201ENST00000532736 1024 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 OR4A43P-201ENST00000532938 908 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 AP000619.2-201ENST00000546014 969 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.95□□□□□ -1.62
CLDN6P56747 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.95□□□□□ -1.62
CLDN6P56747 RPL26P30-202ENST00000602923 645 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.95□□□□□ -1.62
CLDN6P56747 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN6P56747 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.95□□□□□ -1.62
CLDN6P56747 MTCO1P1-201ENST00000624263 1081 ntBASIC4.95□□□□□ -1.62
CLDN6P56747 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.95□□□□□ -1.62
CLDN6P56747 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.95□□□□□ -1.62
CLDN6P56747 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.95□□□□□ -1.62
CLDN6P56747 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.95□□□□□ -1.62
CLDN6P56747 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN6P56747 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN6P56747 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CLDN6P56747 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
CLDN6P56747 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CLDN6P56747 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CLDN6P56747 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDN6P56747 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms