Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
FOXA3P55318 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
FOXA3P55318 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
FOXA3P55318 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXA3P55318 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
FOXA3P55318 MAPK10-303ENST00000641324 3959 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXA3P55318 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXA3P55318 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
FOXA3P55318 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXA3P55318 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXA3P55318 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
FOXA3P55318 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
FOXA3P55318 SUGT1P2-201ENST00000379452 992 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXA3P55318 MIR195-201ENST00000385194 87 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 MIR105-1-201ENST00000385222 81 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 RNA5SP372-201ENST00000390836 115 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 NUDT19P3-201ENST00000404698 555 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 RNA5SP146-201ENST00000410743 123 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 GABARAPL3-201ENST00000412799 354 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXA3P55318 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXA3P55318 SLC35E1P1-201ENST00000419313 864 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXA3P55318 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXA3P55318 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.73□□□□□ -1.81
FOXA3P55318 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXA3P55318 TXNP5-201ENST00000441043 315 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 Z80107.2-201ENST00000445127 392 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 EEF1B2P6-201ENST00000445713 673 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 AC073587.1-201ENST00000447093 876 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 AP006222.1-205ENST00000450734 457 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 AC005008.1-201ENST00000456151 612 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXA3P55318 AC098818.1-201ENST00000478593 252 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXA3P55318 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXA3P55318 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXA3P55318 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXA3P55318 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXA3P55318 AP003033.2-201ENST00000528901 805 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXA3P55318 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC3.73□□□□□ -1.81
FOXA3P55318 BTG1P1-201ENST00000540396 508 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.73□□□□□ -1.81
FOXA3P55318 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
FOXA3P55318 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXA3P55318 GNG2-208ENST00000554875 430 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXA3P55318 AC011270.1-201ENST00000558606 583 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 AC079075.1-201ENST00000559543 878 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.73□□□□□ -1.81
FOXA3P55318 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXA3P55318 AC233280.2-201ENST00000603917 1070 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 AC087783.2-201ENST00000605070 562 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 AC008115.3-201ENST00000614874 549 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXA3P55318 LINC00901.1-201ENST00000617252 152 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 AC004232.3-201ENST00000622977 525 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 FGG-201ENST00000336098 1659 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXA3P55318 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXA3P55318 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXA3P55318 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXA3P55318 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
FOXA3P55318 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 OR14L1P-202ENST00000641545 3009 ntBASIC3.73□□□□□ -1.81
FOXA3P55318 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXA3P55318 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FOXA3P55318 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXA3P55318 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
FOXA3P55318 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC3.72□□□□□ -1.81
FOXA3P55318 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXA3P55318 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FOXA3P55318 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
FOXA3P55318 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXA3P55318 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXA3P55318 RN7SKP184-201ENST00000362348 333 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 U3.3-201ENST00000362986 216 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 AL139039.2-201ENST00000407436 479 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 SEPT7P8-201ENST00000413308 775 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.72□□□□□ -1.81
FOXA3P55318 RPL21P108-201ENST00000413857 481 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 OR51A6P-201ENST00000418680 1004 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 AC004448.2-201ENST00000422360 586 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 PLA2G12AP2-201ENST00000424744 264 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 FMO7P-201ENST00000436045 768 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 Z84478.1-201ENST00000438230 1219 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC3.72□□□□□ -1.81
FOXA3P55318 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.72□□□□□ -1.81
FOXA3P55318 AC104339.1-201ENST00000465478 348 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 RPL5P16-201ENST00000471467 790 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 RPL23AP65-201ENST00000475608 468 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 AC044810.1-201ENST00000480271 711 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 STMN1P2-201ENST00000508435 439 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC3.72□□□□□ -1.81
FOXA3P55318 AC074087.1-201ENST00000512059 724 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.72□□□□□ -1.81
FOXA3P55318 Y_RNA.719-201ENST00000517156 106 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 AC134698.5-201ENST00000519444 336 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms