Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC138749.5-201ENST00000611461 208 ntBASIC6.42□□□□□ -1.38
EPHB3P54753 AL137067.2-201ENST00000621202 131 ntBASIC6.42□□□□□ -1.38
EPHB3P54753 OR11H2-202ENST00000641517 1085 ntBASIC6.42□□□□□ -1.38
EPHB3P54753 AF287957.1-201ENST00000607368 1595 ntBASIC6.42□□□□□ -1.38
EPHB3P54753 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
EPHB3P54753 AC024587.1-201ENST00000505925 2157 ntBASIC6.42□□□□□ -1.38
EPHB3P54753 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.42□□□□□ -1.38
EPHB3P54753 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
EPHB3P54753 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.42□□□□□ -1.38
EPHB3P54753 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
EPHB3P54753 AL359091.1-201ENST00000449048 1734 ntBASIC6.42□□□□□ -1.38
EPHB3P54753 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
EPHB3P54753 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
EPHB3P54753 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
EPHB3P54753 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
EPHB3P54753 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
EPHB3P54753 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
EPHB3P54753 GNL2P1-201ENST00000451274 2190 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
EPHB3P54753 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.41□□□□□ -1.38
EPHB3P54753 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
EPHB3P54753 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
EPHB3P54753 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
EPHB3P54753 AP001541.1-201ENST00000623322 1904 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 ZNF90P1-201ENST00000480493 1951 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
EPHB3P54753 TMSB4XP2-201ENST00000335179 210 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.41□□□□□ -1.38
EPHB3P54753 RNA5SP375-201ENST00000362975 119 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 RNA5SP284-201ENST00000384547 118 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
EPHB3P54753 AC008173.1-201ENST00000418901 264 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AK4P4-201ENST00000419465 646 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 RPL12P43-201ENST00000420608 499 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 RPL7P53-201ENST00000421245 739 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AL035660.1-201ENST00000422041 222 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AL160175.1-201ENST00000428124 247 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.41□□□□□ -1.38
EPHB3P54753 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.41□□□□□ -1.38
EPHB3P54753 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.41□□□□□ -1.38
EPHB3P54753 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
EPHB3P54753 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.41□□□□□ -1.38
EPHB3P54753 AL445466.1-201ENST00000448432 357 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.41□□□□□ -1.38
EPHB3P54753 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.41□□□□□ -1.38
EPHB3P54753 NECAP1P2-201ENST00000455668 727 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 NXT1P1-201ENST00000458481 316 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.41□□□□□ -1.38
EPHB3P54753 AC011476.1-201ENST00000466725 307 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC6.41□□□□□ -1.38
EPHB3P54753 RPS4XP6-201ENST00000477670 797 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AC114728.1-201ENST00000488289 483 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 OR2A3P-201ENST00000493774 953 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC6.41□□□□□ -1.38
EPHB3P54753 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
EPHB3P54753 AP004247.1-201ENST00000531556 1289 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC6.41□□□□□ -1.38
EPHB3P54753 DPPA3P2-202ENST00000557188 1219 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AC087465.1-201ENST00000560574 245 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.41□□□□□ -1.38
EPHB3P54753 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.41□□□□□ -1.38
EPHB3P54753 AC022662.1-201ENST00000580252 331 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 VN1R81P-201ENST00000602085 372 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AC027243.2-201ENST00000602530 724 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AL606834.2-201ENST00000602954 668 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AC079089.3-201ENST00000603094 673 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AP001330.5-201ENST00000607176 411 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.41□□□□□ -1.38
EPHB3P54753 AL445423.1-201ENST00000609941 536 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 TUG1_1.1-201ENST00000610654 145 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AC096861.1-201ENST00000616652 240 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 RBM12B-AS1-201ENST00000623283 653 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 OR8G3P-202ENST00000641572 1255 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
EPHB3P54753 CR381670.1-201ENST00000624291 1693 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
EPHB3P54753 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
EPHB3P54753 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
EPHB3P54753 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
EPHB3P54753 RBPJP7-201ENST00000442803 1447 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 RBPJP5-201ENST00000449433 1447 ntBASIC6.41□□□□□ -1.38
EPHB3P54753 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
EPHB3P54753 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.41□□□□□ -1.38
EPHB3P54753 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
EPHB3P54753 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
EPHB3P54753 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.4□□□□□ -1.38
EPHB3P54753 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
EPHB3P54753 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
EPHB3P54753 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.4□□□□□ -1.38
EPHB3P54753 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
EPHB3P54753 SGO1P2-201ENST00000429458 1589 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 AC011369.2-201ENST00000624423 1567 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.4□□□□□ -1.38
EPHB3P54753 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.4□□□□□ -1.38
EPHB3P54753 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
EPHB3P54753 OR52B3P-201ENST00000314715 928 ntBASIC6.4□□□□□ -1.38
EPHB3P54753 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
EPHB3P54753 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
EPHB3P54753 RNU105B-201ENST00000364478 208 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms