Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.17□□□□□ -1.58
PDX1P52945 RPL5P2-201ENST00000429598 854 ntBASIC5.17□□□□□ -1.58
PDX1P52945 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.17□□□□□ -1.58
PDX1P52945 GAPDHP25-201ENST00000447061 1001 ntBASIC5.17□□□□□ -1.58
PDX1P52945 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.17□□□□□ -1.58
PDX1P52945 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.17□□□□□ -1.58
PDX1P52945 GOLGA5P1-201ENST00000507317 980 ntBASIC5.17□□□□□ -1.58
PDX1P52945 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDX1P52945 NPM1P21-201ENST00000513394 762 ntBASIC5.17□□□□□ -1.58
PDX1P52945 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.17□□□□□ -1.58
PDX1P52945 SNORA70.11-201ENST00000515987 138 ntBASIC5.17□□□□□ -1.58
PDX1P52945 RNU6-491P-201ENST00000516099 110 ntBASIC5.17□□□□□ -1.58
PDX1P52945 SNORA70.13-201ENST00000516116 138 ntBASIC5.17□□□□□ -1.58
PDX1P52945 RNU6-467P-201ENST00000517027 110 ntBASIC5.17□□□□□ -1.58
PDX1P52945 OR4A17P-201ENST00000526032 904 ntBASIC5.17□□□□□ -1.58
PDX1P52945 OR5AZ1P-201ENST00000527448 943 ntBASIC5.17□□□□□ -1.58
PDX1P52945 AC024940.3-201ENST00000538551 316 ntBASIC5.17□□□□□ -1.58
PDX1P52945 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.17□□□□□ -1.58
PDX1P52945 AC092490.3-201ENST00000545370 572 ntBASIC5.17□□□□□ -1.58
PDX1P52945 HMGN2P47-201ENST00000559378 272 ntBASIC5.17□□□□□ -1.58
PDX1P52945 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.17□□□□□ -1.58
PDX1P52945 AC015922.4-201ENST00000612568 690 ntBASIC5.17□□□□□ -1.58
PDX1P52945 AC073575.2-201ENST00000614212 627 ntBASIC5.17□□□□□ -1.58
PDX1P52945 AC007786.3-201ENST00000615154 596 ntBASIC5.17□□□□□ -1.58
PDX1P52945 AL109620.1-201ENST00000618738 1197 ntBASIC5.17□□□□□ -1.58
PDX1P52945 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.17□□□□□ -1.58
PDX1P52945 AC074101.1-201ENST00000637861 241 ntBASIC5.17□□□□□ -1.58
PDX1P52945 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDX1P52945 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
PDX1P52945 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.17□□□□□ -1.58
PDX1P52945 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.17□□□□□ -1.58
PDX1P52945 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
PDX1P52945 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.17□□□□□ -1.58
PDX1P52945 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDX1P52945 SAMM50P1-201ENST00000455403 1399 ntBASIC5.16□□□□□ -1.58
PDX1P52945 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.16□□□□□ -1.58
PDX1P52945 CASC19-281ENST00000642118 1554 ntBASIC5.16□□□□□ -1.58
PDX1P52945 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.16□□□□□ -1.58
PDX1P52945 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDX1P52945 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDX1P52945 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.16□□□□□ -1.58
PDX1P52945 AC083899.1-201ENST00000454465 3819 ntBASIC5.16□□□□□ -1.58
PDX1P52945 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PDX1P52945 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDX1P52945 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.16□□□□□ -1.58
PDX1P52945 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDX1P52945 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDX1P52945 RN7SKP126-201ENST00000411143 300 ntBASIC5.16□□□□□ -1.58
PDX1P52945 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.16□□□□□ -1.58
PDX1P52945 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.16□□□□□ -1.58
PDX1P52945 AC017078.1-201ENST00000416146 368 ntBASIC5.16□□□□□ -1.58
PDX1P52945 AL359265.1-201ENST00000440296 795 ntBASIC5.16□□□□□ -1.58
PDX1P52945 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.16□□□□□ -1.58
PDX1P52945 RAB28P3-201ENST00000448325 597 ntBASIC5.16□□□□□ -1.58
PDX1P52945 MTND2P25-201ENST00000449028 610 ntBASIC5.16□□□□□ -1.58
PDX1P52945 MTND5P8-201ENST00000449817 1083 ntBASIC5.16□□□□□ -1.58
PDX1P52945 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
PDX1P52945 AZGP1P2-201ENST00000454506 345 ntBASIC5.16□□□□□ -1.58
PDX1P52945 CYCSP53-201ENST00000455540 265 ntBASIC5.16□□□□□ -1.58
PDX1P52945 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.16□□□□□ -1.58
PDX1P52945 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.16□□□□□ -1.58
PDX1P52945 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.16□□□□□ -1.58
PDX1P52945 RPS4XP20-201ENST00000505751 772 ntBASIC5.16□□□□□ -1.58
PDX1P52945 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.16□□□□□ -1.58
PDX1P52945 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.16□□□□□ -1.58
PDX1P52945 RNU6-319P-201ENST00000516025 108 ntBASIC5.16□□□□□ -1.58
PDX1P52945 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.16□□□□□ -1.58
PDX1P52945 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.16□□□□□ -1.58
PDX1P52945 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.16□□□□□ -1.58
PDX1P52945 AC125494.2-201ENST00000602431 657 ntBASIC5.16□□□□□ -1.58
PDX1P52945 AC091953.3-201ENST00000623220 236 ntBASIC5.16□□□□□ -1.58
PDX1P52945 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PDX1P52945 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDX1P52945 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDX1P52945 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.16□□□□□ -1.58
PDX1P52945 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.16□□□□□ -1.58
PDX1P52945 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PDX1P52945 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDX1P52945 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
PDX1P52945 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDX1P52945 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
PDX1P52945 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDX1P52945 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDX1P52945 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PDX1P52945 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PDX1P52945 ABCC13-202ENST00000463099 3842 ntBASIC5.15□□□□□ -1.58
PDX1P52945 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.15□□□□□ -1.58
PDX1P52945 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PDX1P52945 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.15□□□□□ -1.58
PDX1P52945 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.15□□□□□ -1.58
PDX1P52945 AL078621.3-201ENST00000623707 2042 ntBASIC5.15□□□□□ -1.58
PDX1P52945 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.15□□□□□ -1.58
PDX1P52945 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDX1P52945 AC092681.1-201ENST00000297369 291 ntBASIC5.15□□□□□ -1.59
PDX1P52945 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PDX1P52945 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PDX1P52945 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.15□□□□□ -1.59
PDX1P52945 AC136624.1-201ENST00000400791 413 ntBASIC5.15□□□□□ -1.59
PDX1P52945 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.15□□□□□ -1.59
PDX1P52945 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms