Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.41□□□□□ -1.54
BRCC3P46736 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.41□□□□□ -1.54
BRCC3P46736 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BRCC3P46736 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
BRCC3P46736 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.41□□□□□ -1.54
BRCC3P46736 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
BRCC3P46736 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
BRCC3P46736 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.41□□□□□ -1.54
BRCC3P46736 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.41□□□□□ -1.54
BRCC3P46736 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BRCC3P46736 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
BRCC3P46736 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.41□□□□□ -1.54
BRCC3P46736 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
BRCC3P46736 AC132825.1-201ENST00000463573 2247 ntBASIC5.4□□□□□ -1.54
BRCC3P46736 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
BRCC3P46736 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.4□□□□□ -1.54
BRCC3P46736 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
BRCC3P46736 ICE2P1-201ENST00000512800 1849 ntBASIC5.4□□□□□ -1.54
BRCC3P46736 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
BRCC3P46736 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
BRCC3P46736 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
BRCC3P46736 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
BRCC3P46736 GAPDHP15-201ENST00000398586 975 ntBASIC5.4□□□□□ -1.54
BRCC3P46736 AL390316.1-201ENST00000406279 553 ntBASIC5.4□□□□□ -1.54
BRCC3P46736 AL035696.2-201ENST00000407941 709 ntBASIC5.4□□□□□ -1.54
BRCC3P46736 SNORA77-201ENST00000408716 125 ntBASIC5.4□□□□□ -1.54
BRCC3P46736 RN7SKP216-201ENST00000411050 312 ntBASIC5.4□□□□□ -1.54
BRCC3P46736 AF186996.5-201ENST00000418098 904 ntBASIC5.4□□□□□ -1.54
BRCC3P46736 AC073648.4-201ENST00000442655 781 ntBASIC5.4□□□□□ -1.54
BRCC3P46736 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.4□□□□□ -1.54
BRCC3P46736 AL354714.3-201ENST00000447284 493 ntBASIC5.4□□□□□ -1.54
BRCC3P46736 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.4□□□□□ -1.54
BRCC3P46736 AC002456.2-201ENST00000509356 380 ntBASIC5.4□□□□□ -1.54
BRCC3P46736 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.4□□□□□ -1.54
BRCC3P46736 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
BRCC3P46736 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.4□□□□□ -1.54
BRCC3P46736 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.4□□□□□ -1.54
BRCC3P46736 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.4□□□□□ -1.54
BRCC3P46736 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
BRCC3P46736 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.4□□□□□ -1.55
BRCC3P46736 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.4□□□□□ -1.55
BRCC3P46736 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
BRCC3P46736 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.4□□□□□ -1.55
BRCC3P46736 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
BRCC3P46736 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
BRCC3P46736 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
BRCC3P46736 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.4□□□□□ -1.55
BRCC3P46736 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
BRCC3P46736 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRCC3P46736 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.39□□□□□ -1.55
BRCC3P46736 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRCC3P46736 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRCC3P46736 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.39□□□□□ -1.55
BRCC3P46736 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
BRCC3P46736 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
BRCC3P46736 RN7SKP115-201ENST00000363177 317 ntBASIC5.39□□□□□ -1.55
BRCC3P46736 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
BRCC3P46736 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.39□□□□□ -1.55
BRCC3P46736 AC009238.2-201ENST00000431026 355 ntBASIC5.39□□□□□ -1.55
BRCC3P46736 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.39□□□□□ -1.55
BRCC3P46736 OR7E125P-201ENST00000443450 846 ntBASIC5.39□□□□□ -1.55
BRCC3P46736 BX842559.2-201ENST00000451418 605 ntBASIC5.39□□□□□ -1.55
BRCC3P46736 MTCO3P42-201ENST00000509488 518 ntBASIC5.39□□□□□ -1.55
BRCC3P46736 MTCO3P39-201ENST00000514812 518 ntBASIC5.39□□□□□ -1.55
BRCC3P46736 RN7SKP5-201ENST00000517045 272 ntBASIC5.39□□□□□ -1.55
BRCC3P46736 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.39□□□□□ -1.55
BRCC3P46736 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.39□□□□□ -1.55
BRCC3P46736 AC115989.2-201ENST00000578640 563 ntBASIC5.39□□□□□ -1.55
BRCC3P46736 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.39□□□□□ -1.55
BRCC3P46736 EIF1P5-201ENST00000585002 234 ntBASIC5.39□□□□□ -1.55
BRCC3P46736 AC138627.1-204ENST00000641894 765 ntBASIC5.39□□□□□ -1.55
BRCC3P46736 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.39□□□□□ -1.55
BRCC3P46736 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRCC3P46736 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.39□□□□□ -1.55
BRCC3P46736 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BRCC3P46736 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.39□□□□□ -1.55
BRCC3P46736 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
BRCC3P46736 OR9K1P-202ENST00000641111 3217 ntBASIC5.38□□□□□ -1.55
BRCC3P46736 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRCC3P46736 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.38□□□□□ -1.55
BRCC3P46736 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
BRCC3P46736 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
BRCC3P46736 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
BRCC3P46736 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
BRCC3P46736 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.38□□□□□ -1.55
BRCC3P46736 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRCC3P46736 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
BRCC3P46736 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
BRCC3P46736 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
BRCC3P46736 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.38□□□□□ -1.55
BRCC3P46736 AL035079.1-201ENST00000405210 287 ntBASIC5.38□□□□□ -1.55
BRCC3P46736 Y_RNA.625-201ENST00000411256 107 ntBASIC5.38□□□□□ -1.55
BRCC3P46736 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.38□□□□□ -1.55
BRCC3P46736 RPA2P2-201ENST00000419698 796 ntBASIC5.38□□□□□ -1.55
BRCC3P46736 HSPD1P12-201ENST00000429127 1069 ntBASIC5.38□□□□□ -1.55
BRCC3P46736 FABP7P2-201ENST00000429946 379 ntBASIC5.38□□□□□ -1.55
BRCC3P46736 RPL7P11-201ENST00000437586 658 ntBASIC5.38□□□□□ -1.55
BRCC3P46736 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
BRCC3P46736 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.38□□□□□ -1.55
BRCC3P46736 AC063943.1-201ENST00000465434 453 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms