Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.37□□□□□ -1.55
TNFSF9P41273 AC073052.1-201ENST00000440417 714 ntBASIC5.37□□□□□ -1.55
TNFSF9P41273 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.37□□□□□ -1.55
TNFSF9P41273 RPL23AP56-201ENST00000460778 453 ntBASIC5.37□□□□□ -1.55
TNFSF9P41273 AL049874.2-201ENST00000492636 288 ntBASIC5.37□□□□□ -1.55
TNFSF9P41273 AC105233.1-201ENST00000498840 781 ntBASIC5.37□□□□□ -1.55
TNFSF9P41273 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.37□□□□□ -1.55
TNFSF9P41273 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.37□□□□□ -1.55
TNFSF9P41273 BRD9P1-201ENST00000529855 560 ntBASIC5.37□□□□□ -1.55
TNFSF9P41273 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.37□□□□□ -1.55
TNFSF9P41273 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
TNFSF9P41273 AC107993.1-201ENST00000591343 684 ntBASIC5.37□□□□□ -1.55
TNFSF9P41273 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.37□□□□□ -1.55
TNFSF9P41273 AL022401.1-201ENST00000619498 108 ntBASIC5.37□□□□□ -1.55
TNFSF9P41273 AC091953.3-201ENST00000623220 236 ntBASIC5.37□□□□□ -1.55
TNFSF9P41273 AC073342.3-201ENST00000624211 193 ntBASIC5.37□□□□□ -1.55
TNFSF9P41273 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFSF9P41273 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.37□□□□□ -1.55
TNFSF9P41273 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF9P41273 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TNFSF9P41273 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TNFSF9P41273 AC011447.7-201ENST00000624228 1590 ntBASIC5.37□□□□□ -1.55
TNFSF9P41273 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TNFSF9P41273 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.37□□□□□ -1.55
TNFSF9P41273 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TNFSF9P41273 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFSF9P41273 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFSF9P41273 AC099654.2-201ENST00000433031 1980 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFSF9P41273 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TNFSF9P41273 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TNFSF9P41273 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TNFSF9P41273 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TNFSF9P41273 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFSF9P41273 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFSF9P41273 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFSF9P41273 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFSF9P41273 RNA5SP191-201ENST00000362585 102 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 RN7SKP149-201ENST00000363008 344 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 HMGB3P7-201ENST00000400214 611 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFSF9P41273 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.36□□□□□ -1.55
TNFSF9P41273 TBCAP2-201ENST00000416175 326 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 QRSL1P2-201ENST00000418582 964 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 AC009506.2-201ENST00000420635 840 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 AC006466.1-201ENST00000438721 289 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.36□□□□□ -1.55
TNFSF9P41273 AC000111.2-201ENST00000448200 210 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFSF9P41273 AC135999.1-201ENST00000478962 479 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.36□□□□□ -1.55
TNFSF9P41273 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.36□□□□□ -1.55
TNFSF9P41273 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFSF9P41273 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.36□□□□□ -1.55
TNFSF9P41273 AC116553.2-201ENST00000564203 463 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.36□□□□□ -1.55
TNFSF9P41273 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.36□□□□□ -1.55
TNFSF9P41273 AC020910.3-201ENST00000603701 874 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
TNFSF9P41273 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
TNFSF9P41273 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFSF9P41273 AC068446.1-201ENST00000556425 1549 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 NLRP3P1-201ENST00000622303 1785 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.36□□□□□ -1.55
TNFSF9P41273 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
TNFSF9P41273 AC132825.1-201ENST00000463573 2247 ntBASIC5.36□□□□□ -1.55
TNFSF9P41273 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFSF9P41273 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TNFSF9P41273 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TNFSF9P41273 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF9P41273 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TNFSF9P41273 SAMMSON-226ENST00000642089 1582 ntBASIC5.35□□□□□ -1.55
TNFSF9P41273 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF9P41273 SNORA73.1-201ENST00000363107 205 ntBASIC5.35□□□□□ -1.55
TNFSF9P41273 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.35□□□□□ -1.55
TNFSF9P41273 RPL12P43-201ENST00000420608 499 ntBASIC5.35□□□□□ -1.55
TNFSF9P41273 OR52J1P-201ENST00000450596 932 ntBASIC5.35□□□□□ -1.55
TNFSF9P41273 AC108751.3-201ENST00000461814 1020 ntBASIC5.35□□□□□ -1.55
TNFSF9P41273 AC021660.1-201ENST00000465006 554 ntBASIC5.35□□□□□ -1.55
TNFSF9P41273 AC063943.1-201ENST00000465434 453 ntBASIC5.35□□□□□ -1.55
TNFSF9P41273 AC083982.1-201ENST00000485679 344 ntBASIC5.35□□□□□ -1.55
TNFSF9P41273 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
TNFSF9P41273 GAPDHP56-201ENST00000506031 988 ntBASIC5.35□□□□□ -1.55
TNFSF9P41273 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.35□□□□□ -1.55
TNFSF9P41273 AC026688.1-201ENST00000520639 1168 ntBASIC5.35□□□□□ -1.55
TNFSF9P41273 TVP23CP2-201ENST00000571473 623 ntBASIC5.35□□□□□ -1.55
TNFSF9P41273 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.35□□□□□ -1.55
TNFSF9P41273 AL049794.2-201ENST00000616301 365 ntBASIC5.35□□□□□ -1.55
TNFSF9P41273 AC019206.1-201ENST00000621938 425 ntBASIC5.35□□□□□ -1.55
TNFSF9P41273 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.35□□□□□ -1.55
TNFSF9P41273 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TNFSF9P41273 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.35□□□□□ -1.55
TNFSF9P41273 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
TNFSF9P41273 OFD1P17-201ENST00000437639 3018 ntBASIC5.35□□□□□ -1.55
TNFSF9P41273 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TNFSF9P41273 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNFSF9P41273 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TNFSF9P41273 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TNFSF9P41273 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms