Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC7.57□□□□□ -1.2
RFX1P22670 AC090971.3-201ENST00000557871 1041 ntBASIC7.57□□□□□ -1.2
RFX1P22670 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7.57□□□□□ -1.2
RFX1P22670 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC7.57□□□□□ -1.2
RFX1P22670 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC7.57□□□□□ -1.2
RFX1P22670 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.57□□□□□ -1.2
RFX1P22670 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.57□□□□□ -1.2
RFX1P22670 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.57□□□□□ -1.2
RFX1P22670 AC119501.1-201ENST00000603646 475 ntBASIC7.57□□□□□ -1.2
RFX1P22670 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.57□□□□□ -1.2
RFX1P22670 AC006566.1-201ENST00000608943 513 ntBASIC7.57□□□□□ -1.2
RFX1P22670 MIR7109-201ENST00000613748 65 ntBASIC7.57□□□□□ -1.2
RFX1P22670 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RFX1P22670 AL356596.1-201ENST00000624230 379 ntBASIC7.57□□□□□ -1.2
RFX1P22670 OR52B5P-202ENST00000641118 1110 ntBASIC7.57□□□□□ -1.2
RFX1P22670 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RFX1P22670 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RFX1P22670 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.57□□□□□ -1.2
RFX1P22670 AC015689.2-201ENST00000528172 1738 ntBASIC7.57□□□□□ -1.2
RFX1P22670 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.57□□□□□ -1.2
RFX1P22670 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.57□□□□□ -1.2
RFX1P22670 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
RFX1P22670 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RFX1P22670 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC7.57□□□□□ -1.2
RFX1P22670 MRE11P1-201ENST00000464884 2127 ntBASIC7.57□□□□□ -1.2
RFX1P22670 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RFX1P22670 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
RFX1P22670 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
RFX1P22670 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RFX1P22670 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RFX1P22670 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.56□□□□□ -1.2
RFX1P22670 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RFX1P22670 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RFX1P22670 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.56□□□□□ -1.2
RFX1P22670 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RFX1P22670 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.56□□□□□ -1.2
RFX1P22670 RNU1-24P-201ENST00000364285 165 ntBASIC7.56□□□□□ -1.2
RFX1P22670 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RFX1P22670 BTF3P7-201ENST00000407097 488 ntBASIC7.56□□□□□ -1.2
RFX1P22670 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RFX1P22670 RPL7P56-201ENST00000429441 717 ntBASIC7.56□□□□□ -1.2
RFX1P22670 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.56□□□□□ -1.2
RFX1P22670 AC122718.1-201ENST00000439448 744 ntBASIC7.56□□□□□ -1.2
RFX1P22670 DBIL5P2-201ENST00000443827 253 ntBASIC7.56□□□□□ -1.2
RFX1P22670 NANOGNBP1-201ENST00000448444 480 ntBASIC7.56□□□□□ -1.2
RFX1P22670 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.56□□□□□ -1.2
RFX1P22670 SNORD42A-201ENST00000459584 64 ntBASIC7.56□□□□□ -1.2
RFX1P22670 RN7SL372P-201ENST00000461982 298 ntBASIC7.56□□□□□ -1.2
RFX1P22670 FAM133DP-201ENST00000464802 691 ntBASIC7.56□□□□□ -1.2
RFX1P22670 RN7SL149P-201ENST00000465197 281 ntBASIC7.56□□□□□ -1.2
RFX1P22670 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.56□□□□□ -1.2
RFX1P22670 AC091982.1-202ENST00000473923 343 ntBASIC7.56□□□□□ -1.2
RFX1P22670 AC099521.1-201ENST00000482557 334 ntBASIC7.56□□□□□ -1.2
RFX1P22670 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC7.56□□□□□ -1.2
RFX1P22670 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.56□□□□□ -1.2
RFX1P22670 RPL7P24-201ENST00000493052 752 ntBASIC7.56□□□□□ -1.2
RFX1P22670 AC106822.1-201ENST00000502647 526 ntBASIC7.56□□□□□ -1.2
RFX1P22670 KLRA1P-201ENST00000503499 986 ntBASIC7.56□□□□□ -1.2
RFX1P22670 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC7.56□□□□□ -1.2
RFX1P22670 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC7.56□□□□□ -1.2
RFX1P22670 AC106800.2-201ENST00000514009 1103 ntBASIC7.56□□□□□ -1.2
RFX1P22670 RN7SKP283-201ENST00000517197 270 ntBASIC7.56□□□□□ -1.2
RFX1P22670 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC7.56□□□□□ -1.2
RFX1P22670 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.56□□□□□ -1.2
RFX1P22670 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.56□□□□□ -1.2
RFX1P22670 AL591767.3-201ENST00000554632 525 ntBASIC7.56□□□□□ -1.2
RFX1P22670 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.56□□□□□ -1.2
RFX1P22670 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RFX1P22670 MIR548AB-201ENST00000584917 84 ntBASIC7.56□□□□□ -1.2
RFX1P22670 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC7.56□□□□□ -1.2
RFX1P22670 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC7.56□□□□□ -1.2
RFX1P22670 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.56□□□□□ -1.2
RFX1P22670 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC7.56□□□□□ -1.2
RFX1P22670 VN1R84P-201ENST00000593697 235 ntBASIC7.56□□□□□ -1.2
RFX1P22670 RPS27AP19-201ENST00000597285 458 ntBASIC7.56□□□□□ -1.2
RFX1P22670 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.56□□□□□ -1.2
RFX1P22670 AC107214.2-201ENST00000608204 634 ntBASIC7.56□□□□□ -1.2
RFX1P22670 AC090517.2-201ENST00000614966 680 ntBASIC7.56□□□□□ -1.2
RFX1P22670 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.56□□□□□ -1.2
RFX1P22670 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RFX1P22670 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RFX1P22670 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RFX1P22670 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RFX1P22670 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.56□□□□□ -1.2
RFX1P22670 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC7.56□□□□□ -1.2
RFX1P22670 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RFX1P22670 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
RFX1P22670 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RFX1P22670 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.56□□□□□ -1.2
RFX1P22670 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.55□□□□□ -1.2
RFX1P22670 MKI67P1-201ENST00000604297 1460 ntBASIC7.55□□□□□ -1.2
RFX1P22670 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RFX1P22670 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.55□□□□□ -1.2
RFX1P22670 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.55□□□□□ -1.2
RFX1P22670 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.55□□□□□ -1.2
RFX1P22670 AC114786.1-201ENST00000512892 1415 ntBASIC7.55□□□□□ -1.2
RFX1P22670 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RFX1P22670 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RFX1P22670 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.55□□□□□ -1.2
RFX1P22670 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms