Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.38□□□□□ -1.55
PCNAP12004 RPL5P13-201ENST00000462840 709 ntBASIC5.38□□□□□ -1.55
PCNAP12004 AC094085.1-201ENST00000468914 584 ntBASIC5.38□□□□□ -1.55
PCNAP12004 NPM1P29-201ENST00000483112 803 ntBASIC5.38□□□□□ -1.55
PCNAP12004 AC008410.1-201ENST00000483777 339 ntBASIC5.38□□□□□ -1.55
PCNAP12004 RPS3AP15-201ENST00000483874 781 ntBASIC5.38□□□□□ -1.55
PCNAP12004 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.38□□□□□ -1.55
PCNAP12004 RNU6-415P-201ENST00000516252 97 ntBASIC5.38□□□□□ -1.55
PCNAP12004 RN7SKP253-201ENST00000516424 309 ntBASIC5.38□□□□□ -1.55
PCNAP12004 OR8A2P-201ENST00000528631 952 ntBASIC5.38□□□□□ -1.55
PCNAP12004 OR5AM1P-201ENST00000532136 1032 ntBASIC5.38□□□□□ -1.55
PCNAP12004 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.38□□□□□ -1.55
PCNAP12004 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.38□□□□□ -1.55
PCNAP12004 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.38□□□□□ -1.55
PCNAP12004 DPPA2P4-201ENST00000563717 878 ntBASIC5.38□□□□□ -1.55
PCNAP12004 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PCNAP12004 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.38□□□□□ -1.55
PCNAP12004 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.38□□□□□ -1.55
PCNAP12004 AC126365.2-201ENST00000580630 379 ntBASIC5.38□□□□□ -1.55
PCNAP12004 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.38□□□□□ -1.55
PCNAP12004 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.38□□□□□ -1.55
PCNAP12004 AL365181.4-201ENST00000609800 547 ntBASIC5.38□□□□□ -1.55
PCNAP12004 MIR8084-201ENST00000614105 89 ntBASIC5.38□□□□□ -1.55
PCNAP12004 AL138955.1-201ENST00000622881 1040 ntBASIC5.38□□□□□ -1.55
PCNAP12004 AP000943.4-201ENST00000622912 357 ntBASIC5.38□□□□□ -1.55
PCNAP12004 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PCNAP12004 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCNAP12004 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCNAP12004 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.38□□□□□ -1.55
PCNAP12004 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCNAP12004 HSPA8P19-201ENST00000505359 1517 ntBASIC5.38□□□□□ -1.55
PCNAP12004 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCNAP12004 AC112198.2-201ENST00000426589 6996 ntBASIC5.37□□□□□ -1.55
PCNAP12004 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PCNAP12004 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.37□□□□□ -1.55
PCNAP12004 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCNAP12004 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
PCNAP12004 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.37□□□□□ -1.55
PCNAP12004 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.37□□□□□ -1.55
PCNAP12004 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
PCNAP12004 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PCNAP12004 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PCNAP12004 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.37□□□□□ -1.55
PCNAP12004 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.37□□□□□ -1.55
PCNAP12004 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.37□□□□□ -1.55
PCNAP12004 RPSAP35-201ENST00000413753 818 ntBASIC5.37□□□□□ -1.55
PCNAP12004 SLC20A1P1-201ENST00000413906 956 ntBASIC5.37□□□□□ -1.55
PCNAP12004 VN1R37P-201ENST00000419096 748 ntBASIC5.37□□□□□ -1.55
PCNAP12004 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.37□□□□□ -1.55
PCNAP12004 AL138787.1-202ENST00000437804 898 ntBASIC5.37□□□□□ -1.55
PCNAP12004 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.37□□□□□ -1.55
PCNAP12004 RPS10P18-201ENST00000442662 495 ntBASIC5.37□□□□□ -1.55
PCNAP12004 AC092106.1-201ENST00000444291 373 ntBASIC5.37□□□□□ -1.55
PCNAP12004 LINC02210-201ENST00000444561 288 ntBASIC5.37□□□□□ -1.55
PCNAP12004 MOB1AP2-201ENST00000446060 614 ntBASIC5.37□□□□□ -1.55
PCNAP12004 IGBP1P3-201ENST00000447449 1000 ntBASIC5.37□□□□□ -1.55
PCNAP12004 AL445665.1-202ENST00000452436 324 ntBASIC5.37□□□□□ -1.55
PCNAP12004 NPM1P17-201ENST00000479221 602 ntBASIC5.37□□□□□ -1.55
PCNAP12004 SUMO1P1-201ENST00000497904 306 ntBASIC5.37□□□□□ -1.55
PCNAP12004 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.37□□□□□ -1.55
PCNAP12004 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCNAP12004 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.37□□□□□ -1.55
PCNAP12004 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCNAP12004 SNORA43.3-201ENST00000517240 103 ntBASIC5.37□□□□□ -1.55
PCNAP12004 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.37□□□□□ -1.55
PCNAP12004 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.37□□□□□ -1.55
PCNAP12004 C1DP5-201ENST00000525775 383 ntBASIC5.37□□□□□ -1.55
PCNAP12004 NANOGNBP2-201ENST00000544753 553 ntBASIC5.37□□□□□ -1.55
PCNAP12004 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.37□□□□□ -1.55
PCNAP12004 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.37□□□□□ -1.55
PCNAP12004 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.37□□□□□ -1.55
PCNAP12004 AC009962.1-201ENST00000567327 3813 ntBASIC5.37□□□□□ -1.55
PCNAP12004 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.37□□□□□ -1.55
PCNAP12004 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.37□□□□□ -1.55
PCNAP12004 H3F3BP2-201ENST00000583907 357 ntBASIC5.37□□□□□ -1.55
PCNAP12004 AL137072.1-201ENST00000603444 466 ntBASIC5.37□□□□□ -1.55
PCNAP12004 AC073137.1-201ENST00000605636 634 ntBASIC5.37□□□□□ -1.55
PCNAP12004 AC104763.3-201ENST00000613765 618 ntBASIC5.37□□□□□ -1.55
PCNAP12004 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.37□□□□□ -1.55
PCNAP12004 MIR193BHG-214ENST00000641765 509 ntBASIC5.37□□□□□ -1.55
PCNAP12004 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCNAP12004 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.37□□□□□ -1.55
PCNAP12004 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCNAP12004 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCNAP12004 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCNAP12004 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCNAP12004 AC021242.1-201ENST00000507315 2035 ntBASIC5.36□□□□□ -1.55
PCNAP12004 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PCNAP12004 AC104260.2-201ENST00000623551 3497 ntBASIC5.36□□□□□ -1.55
PCNAP12004 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCNAP12004 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCNAP12004 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
PCNAP12004 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.36□□□□□ -1.55
PCNAP12004 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.36□□□□□ -1.55
PCNAP12004 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCNAP12004 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.36□□□□□ -1.55
PCNAP12004 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.36□□□□□ -1.55
PCNAP12004 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCNAP12004 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.36□□□□□ -1.55
PCNAP12004 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms