Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 BX284632.2-201ENST00000421091 399 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 VN1R21P-201ENST00000426703 765 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.92□□□□□ -1.3
HMGB1P09429 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.92□□□□□ -1.3
HMGB1P09429 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.92□□□□□ -1.3
HMGB1P09429 UBE2V1P5-201ENST00000440070 405 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 EIF5AP4-201ENST00000441206 465 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 AC092809.1-201ENST00000441469 474 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 AL512605.1-202ENST00000441919 381 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 AL359955.2-201ENST00000445380 353 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC6.92□□□□□ -1.3
HMGB1P09429 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P09429 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGB1P09429 PPM1AP1-201ENST00000502740 1135 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGB1P09429 RPL7L1P13-201ENST00000511702 739 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGB1P09429 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P09429 AF186190.1-201ENST00000517470 480 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.92□□□□□ -1.3
HMGB1P09429 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGB1P09429 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.92□□□□□ -1.3
HMGB1P09429 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGB1P09429 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGB1P09429 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.92□□□□□ -1.3
HMGB1P09429 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.92□□□□□ -1.3
HMGB1P09429 AL513327.3-201ENST00000602618 469 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 MIR7109-201ENST00000613748 65 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC6.92□□□□□ -1.3
HMGB1P09429 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P09429 AC073592.6-201ENST00000624271 415 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 AP003400.6-201ENST00000624698 740 ntBASIC6.92□□□□□ -1.3
HMGB1P09429 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P09429 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P09429 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P09429 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P09429 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HMGB1P09429 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGB1P09429 AP000473.2-201ENST00000602659 1537 ntBASIC6.91□□□□□ -1.3
HMGB1P09429 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.91□□□□□ -1.3
HMGB1P09429 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HMGB1P09429 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
HMGB1P09429 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGB1P09429 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGB1P09429 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HMGB1P09429 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGB1P09429 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGB1P09429 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
HMGB1P09429 RPL23AP59-201ENST00000399415 461 ntBASIC6.91□□□□□ -1.3
HMGB1P09429 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.91□□□□□ -1.3
HMGB1P09429 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.91□□□□□ -1.3
HMGB1P09429 METTL15P3-201ENST00000415522 1221 ntBASIC6.91□□□□□ -1.3
HMGB1P09429 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.91□□□□□ -1.3
HMGB1P09429 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGB1P09429 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.91□□□□□ -1.3
HMGB1P09429 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.91□□□□□ -1.3
HMGB1P09429 AC092170.1-201ENST00000440211 356 ntBASIC6.91□□□□□ -1.3
HMGB1P09429 DNAJC19P8-201ENST00000452887 259 ntBASIC6.91□□□□□ -1.3
HMGB1P09429 RANP1-206ENST00000455094 651 ntBASIC6.91□□□□□ -1.3
HMGB1P09429 AL157777.1-201ENST00000468100 304 ntBASIC6.91□□□□□ -1.3
HMGB1P09429 CBX1P5-201ENST00000475330 559 ntBASIC6.91□□□□□ -1.3
HMGB1P09429 RN7SL193P-201ENST00000491708 276 ntBASIC6.91□□□□□ -1.3
HMGB1P09429 RNA5SP340-201ENST00000517132 107 ntBASIC6.91□□□□□ -1.3
HMGB1P09429 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.91□□□□□ -1.3
HMGB1P09429 AC126615.2-201ENST00000553003 515 ntBASIC6.91□□□□□ -1.3
HMGB1P09429 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.91□□□□□ -1.3
HMGB1P09429 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGB1P09429 AC112503.2-201ENST00000609005 552 ntBASIC6.91□□□□□ -1.3
HMGB1P09429 AC017104.5-201ENST00000637647 639 ntBASIC6.91□□□□□ -1.3
HMGB1P09429 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.91□□□□□ -1.3
HMGB1P09429 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HMGB1P09429 AL592437.2-201ENST00000421655 2434 ntBASIC6.91□□□□□ -1.3
HMGB1P09429 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.91□□□□□ -1.3
HMGB1P09429 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.91□□□□□ -1.3
HMGB1P09429 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HMGB1P09429 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HMGB1P09429 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HMGB1P09429 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.9□□□□□ -1.3
HMGB1P09429 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HMGB1P09429 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HMGB1P09429 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
HMGB1P09429 AC074029.4-201ENST00000624796 1859 ntBASIC6.9□□□□□ -1.3
HMGB1P09429 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
HMGB1P09429 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.9□□□□□ -1.3
HMGB1P09429 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HMGB1P09429 RNU6-1339P-201ENST00000363574 91 ntBASIC6.9□□□□□ -1.3
HMGB1P09429 MIR525-201ENST00000384978 85 ntBASIC6.9□□□□□ -1.3
HMGB1P09429 GAPDHP42-201ENST00000406848 981 ntBASIC6.9□□□□□ -1.3
HMGB1P09429 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGB1P09429 RN7SKP17-201ENST00000411242 351 ntBASIC6.9□□□□□ -1.3
HMGB1P09429 AC004022.2-201ENST00000413824 193 ntBASIC6.9□□□□□ -1.3
HMGB1P09429 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGB1P09429 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HMGB1P09429 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGB1P09429 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGB1P09429 RPS26P40-201ENST00000435209 294 ntBASIC6.9□□□□□ -1.3
HMGB1P09429 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGB1P09429 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGB1P09429 AMYP1-201ENST00000440059 1023 ntBASIC6.9□□□□□ -1.3
HMGB1P09429 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms