Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RETP07949 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RETP07949 GAPDHP15-201ENST00000398586 975 ntBASIC5.34□□□□□ -1.55
RETP07949 AC234781.4-201ENST00000419384 244 ntBASIC5.34□□□□□ -1.55
RETP07949 RPL12P17-201ENST00000432393 498 ntBASIC5.34□□□□□ -1.55
RETP07949 NDUFB4P8-201ENST00000435351 367 ntBASIC5.34□□□□□ -1.55
RETP07949 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.34□□□□□ -1.55
RETP07949 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.34□□□□□ -1.55
RETP07949 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.34□□□□□ -1.55
RETP07949 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.34□□□□□ -1.55
RETP07949 AL596266.1-201ENST00000448132 400 ntBASIC5.34□□□□□ -1.55
RETP07949 AC091153.1-201ENST00000466297 402 ntBASIC5.34□□□□□ -1.55
RETP07949 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.34□□□□□ -1.55
RETP07949 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.34□□□□□ -1.55
RETP07949 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RETP07949 RFPL4AP5-201ENST00000514977 504 ntBASIC5.34□□□□□ -1.55
RETP07949 OR5AN2P-201ENST00000534535 896 ntBASIC5.34□□□□□ -1.55
RETP07949 AC008033.2-201ENST00000542626 177 ntBASIC5.34□□□□□ -1.55
RETP07949 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.34□□□□□ -1.55
RETP07949 AC083809.1-201ENST00000615051 472 ntBASIC5.34□□□□□ -1.55
RETP07949 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RETP07949 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.34□□□□□ -1.55
RETP07949 GVINP1-202ENST00000531871 7271 ntBASIC5.34□□□□□ -1.55
RETP07949 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.34□□□□□ -1.55
RETP07949 AC092376.2-201ENST00000622621 4116 ntBASIC5.34□□□□□ -1.55
RETP07949 AL022311.1-201ENST00000623726 19416 ntBASIC5.33□□□□□ -1.56
RETP07949 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RETP07949 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.33□□□□□ -1.56
RETP07949 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RETP07949 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RETP07949 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.33□□□□□ -1.56
RETP07949 NR1H5P-201ENST00000452683 1377 ntBASIC5.33□□□□□ -1.56
RETP07949 AC079097.1-201ENST00000512187 1399 ntBASIC5.33□□□□□ -1.56
RETP07949 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RETP07949 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RETP07949 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
RETP07949 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.33□□□□□ -1.56
RETP07949 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.33□□□□□ -1.56
RETP07949 RNA5SP326-201ENST00000363209 110 ntBASIC5.33□□□□□ -1.56
RETP07949 RNU2-50P-201ENST00000410494 143 ntBASIC5.33□□□□□ -1.56
RETP07949 GJA6P-201ENST00000415117 1042 ntBASIC5.33□□□□□ -1.56
RETP07949 AC007161.1-204ENST00000423039 460 ntBASIC5.33□□□□□ -1.56
RETP07949 SETP10-201ENST00000424368 814 ntBASIC5.33□□□□□ -1.56
RETP07949 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.33□□□□□ -1.56
RETP07949 AC092647.2-201ENST00000452998 253 ntBASIC5.33□□□□□ -1.56
RETP07949 AC002553.2-201ENST00000453217 340 ntBASIC5.33□□□□□ -1.56
RETP07949 RPS4XP12-201ENST00000461747 709 ntBASIC5.33□□□□□ -1.56
RETP07949 ABCC13-202ENST00000463099 3842 ntBASIC5.33□□□□□ -1.56
RETP07949 AC097484.1-201ENST00000471148 389 ntBASIC5.33□□□□□ -1.56
RETP07949 RPL7P40-201ENST00000481703 745 ntBASIC5.33□□□□□ -1.56
RETP07949 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.33□□□□□ -1.56
RETP07949 IGLV2-34-201ENST00000490007 283 ntBASIC5.33□□□□□ -1.56
RETP07949 IGBP1P5-201ENST00000507524 1000 ntBASIC5.33□□□□□ -1.56
RETP07949 RNU6-513P-201ENST00000516104 104 ntBASIC5.33□□□□□ -1.56
RETP07949 RNA5SP230-201ENST00000517039 122 ntBASIC5.33□□□□□ -1.56
RETP07949 PMS2P3-207ENST00000529061 717 ntBASIC5.33□□□□□ -1.56
RETP07949 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.33□□□□□ -1.56
RETP07949 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.33□□□□□ -1.56
RETP07949 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.33□□□□□ -1.56
RETP07949 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.33□□□□□ -1.56
RETP07949 AC209154.1-201ENST00000582156 337 ntBASIC5.33□□□□□ -1.56
RETP07949 MIR4660-201ENST00000583549 74 ntBASIC5.33□□□□□ -1.56
RETP07949 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.33□□□□□ -1.56
RETP07949 SMG1P7-201ENST00000565246 2704 ntBASIC5.33□□□□□ -1.56
RETP07949 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RETP07949 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RETP07949 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RETP07949 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
RETP07949 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RETP07949 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.33□□□□□ -1.56
RETP07949 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RETP07949 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RETP07949 TCP1P3-201ENST00000414406 1498 ntBASIC5.32□□□□□ -1.56
RETP07949 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.32□□□□□ -1.56
RETP07949 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RETP07949 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RETP07949 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RETP07949 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.32□□□□□ -1.56
RETP07949 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.32□□□□□ -1.56
RETP07949 SETP15-201ENST00000412724 337 ntBASIC5.32□□□□□ -1.56
RETP07949 AC119751.6-201ENST00000416712 186 ntBASIC5.32□□□□□ -1.56
RETP07949 AC019050.1-201ENST00000418508 492 ntBASIC5.32□□□□□ -1.56
RETP07949 OR2AM1P-201ENST00000422137 422 ntBASIC5.32□□□□□ -1.56
RETP07949 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.32□□□□□ -1.56
RETP07949 HSPD1P12-201ENST00000429127 1069 ntBASIC5.32□□□□□ -1.56
RETP07949 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.32□□□□□ -1.56
RETP07949 MTCYBP21-201ENST00000443300 1113 ntBASIC5.32□□□□□ -1.56
RETP07949 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.32□□□□□ -1.56
RETP07949 AL589765.3-201ENST00000446084 462 ntBASIC5.32□□□□□ -1.56
RETP07949 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.32□□□□□ -1.56
RETP07949 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.32□□□□□ -1.56
RETP07949 GTF2F2P1-201ENST00000511083 675 ntBASIC5.32□□□□□ -1.56
RETP07949 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.32□□□□□ -1.56
RETP07949 RN7SKP253-201ENST00000516424 309 ntBASIC5.32□□□□□ -1.56
RETP07949 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.32□□□□□ -1.56
RETP07949 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.32□□□□□ -1.56
RETP07949 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.32□□□□□ -1.56
RETP07949 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.32□□□□□ -1.56
RETP07949 AP002373.2-201ENST00000541631 1060 ntBASIC5.32□□□□□ -1.56
RETP07949 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms