Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MT-ND1P03886 PCAT14-202ENST00000627127 3935 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 SALL4P2-201ENST00000423288 2910 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MT-ND1P03886 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MT-ND1P03886 AL731566.1-201ENST00000620490 1937 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.85□□□□□ -1.63
MT-ND1P03886 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MT-ND1P03886 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MT-ND1P03886 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MT-ND1P03886 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MT-ND1P03886 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
MT-ND1P03886 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
MT-ND1P03886 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.85□□□□□ -1.63
MT-ND1P03886 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MT-ND1P03886 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
MT-ND1P03886 RNU4-23P-201ENST00000362839 140 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MT-ND1P03886 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MT-ND1P03886 RNA5SP284-201ENST00000384547 118 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 DHFRP5-201ENST00000406944 564 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 MTND3P20-201ENST00000407663 186 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 AC007738.1-201ENST00000413892 348 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 SDHDP6-201ENST00000414693 480 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.85□□□□□ -1.63
MT-ND1P03886 RPL34P6-201ENST00000432390 345 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.85□□□□□ -1.63
MT-ND1P03886 RPL35AP21-201ENST00000437667 333 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 XKRYP6-201ENST00000440468 1116 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 BTBD7P2-201ENST00000441962 620 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 XKRYP3-201ENST00000442113 1116 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.85□□□□□ -1.63
MT-ND1P03886 GAPDHP25-201ENST00000447061 1001 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.85□□□□□ -1.63
MT-ND1P03886 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.85□□□□□ -1.63
MT-ND1P03886 RNA5SP103-201ENST00000459503 118 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AC084754.1-201ENST00000463466 464 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MT-ND1P03886 AC090638.1-201ENST00000498296 909 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AC117525.1-201ENST00000515228 503 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.85□□□□□ -1.63
MT-ND1P03886 BNIP3P1-201ENST00000547295 580 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MT-ND1P03886 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AC008814.1-201ENST00000603797 406 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 BX322635.1-201ENST00000605804 496 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AC015871.5-202ENST00000623252 701 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.85□□□□□ -1.63
MT-ND1P03886 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
MT-ND1P03886 HSPA8P17-201ENST00000427029 1382 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
MT-ND1P03886 AC011447.7-201ENST00000624228 1590 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 CASC19-281ENST00000642118 1554 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MT-ND1P03886 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MT-ND1P03886 AP001642.1-201ENST00000624727 2117 ntBASIC4.85□□□□□ -1.63
MT-ND1P03886 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.85□□□□□ -1.63
MT-ND1P03886 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MT-ND1P03886 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MT-ND1P03886 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
MT-ND1P03886 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MT-ND1P03886 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MT-ND1P03886 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
MT-ND1P03886 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
MT-ND1P03886 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
MT-ND1P03886 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MT-ND1P03886 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
MT-ND1P03886 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.84□□□□□ -1.63
MT-ND1P03886 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MT-ND1P03886 NXF4-202ENST00000416098 1465 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MT-ND1P03886 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MT-ND1P03886 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
MT-ND1P03886 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.84□□□□□ -1.63
MT-ND1P03886 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.63
MT-ND1P03886 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
MT-ND1P03886 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MT-ND1P03886 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.84□□□□□ -1.63
MT-ND1P03886 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
MT-ND1P03886 RNU6-891P-201ENST00000384280 111 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 AL136131.1-201ENST00000406079 803 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 GABARAPL3-201ENST00000412799 354 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 GLUD1P9-201ENST00000420997 1173 ntBASIC4.84□□□□□ -1.63
MT-ND1P03886 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.84□□□□□ -1.63
MT-ND1P03886 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.84□□□□□ -1.63
MT-ND1P03886 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms