Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 AL049794.2-201ENST00000616301 365 ntBASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 AC109446.4-201ENST00000623235 2755 ntBASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.33□□□□□ -1.56
SMIM28A0A1B0GU29 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 AC063976.2-201ENST00000425667 3556 ntBASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 RNA5SP113-201ENST00000410486 84 ntBASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 AC004074.1-201ENST00000421810 1063 ntBASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 FABP7P2-201ENST00000429946 379 ntBASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 RBMY2TP-201ENST00000451162 947 ntBASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 UBE2FP2-201ENST00000566646 462 ntBASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 MIR3667-201ENST00000581025 74 ntBASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 MAPK10-338ENST00000641647 3362 ntBASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 SDAD1P1-202ENST00000524156 2051 ntBASIC5.32□□□□□ -1.56
SMIM28A0A1B0GU29 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 TRIM51GP-201ENST00000534741 1350 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 RNVU1-6-201ENST00000364688 164 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AL357515.1-201ENST00000402967 542 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 RPL10P10-201ENST00000403509 664 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 RN7SKP16-201ENST00000410180 299 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AC079809.1-201ENST00000415468 276 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AC017078.1-201ENST00000416146 368 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AL136231.1-201ENST00000429407 730 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 RPL5P25-201ENST00000441148 775 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 SLC25A18P1-201ENST00000449385 454 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AURKAPS2-201ENST00000454983 333 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AC007686.1-201ENST00000488511 463 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AL391358.1-201ENST00000605342 190 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AL136295.6-201ENST00000610486 658 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AC019206.1-201ENST00000621938 425 ntBASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.31□□□□□ -1.56
SMIM28A0A1B0GU29 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 ZNF652P1-201ENST00000442420 1309 ntBASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMIM28A0A1B0GU29 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms