Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CLIP2Q9UDT6 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 THAP12P5-201ENST00000405864 2275 ntBASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 SNORA48.4-201ENST00000391089 134 ntBASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 RPL21P67-201ENST00000402896 478 ntBASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 RPL12P9-201ENST00000412942 488 ntBASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 AC124944.2-201ENST00000429866 1242 ntBASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 NOP56P2-201ENST00000447491 769 ntBASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 RPL7P61-201ENST00000451721 751 ntBASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 AP000797.2-201ENST00000475768 606 ntBASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 AC231760.1-201ENST00000498002 260 ntBASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 IMPA1P1-201ENST00000510718 842 ntBASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 AC027369.5-201ENST00000533838 755 ntBASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 OR1F2P-201ENST00000570470 933 ntBASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 AC008814.1-201ENST00000603797 406 ntBASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CLIP2Q9UDT6 NAMPTP1-201ENST00000440465 2514 ntBASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 SNURFL-201ENST00000309296 343 ntBASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 RBMY2QP-201ENST00000429799 1147 ntBASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 AC108161.1-201ENST00000461060 402 ntBASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 RPS4XP12-201ENST00000461747 709 ntBASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 AC097484.1-201ENST00000471148 389 ntBASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 RPL7P41-201ENST00000485823 957 ntBASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 AC022133.1-201ENST00000490961 571 ntBASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 NDUFB5P1-201ENST00000508134 564 ntBASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 AC006427.1-201ENST00000514359 712 ntBASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLIP2Q9UDT6 AC053481.2-202ENST00000582394 1500 ntBASIC6.09□□□□□ -1.44
CLIP2Q9UDT6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 AC104623.2-202ENST00000623477 4002 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 AC022417.1-201ENST00000624768 1303 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 THAP12P4-201ENST00000528321 2266 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 MIR550A3-201ENST00000390735 95 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 MIR937-201ENST00000401271 86 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 AL109941.1-201ENST00000401925 229 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 SNORA81-201ENST00000408493 178 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 VN1R54P-201ENST00000435210 1049 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 RNU6-513P-201ENST00000516104 104 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms