Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 RPS26P13-201ENST00000419030 330 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AL590762.4-201ENST00000425885 253 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 UBE2V2P1-201ENST00000434717 398 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 MED28P3-201ENST00000444288 531 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 HIGD1AP8-201ENST00000453927 274 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AC104849.1-201ENST00000462623 405 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 TRBV8-1-201ENST00000481590 279 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 HMGN2P25-201ENST00000486956 268 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 RPL37AP8-201ENST00000494116 276 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 IMPA1P1-201ENST00000510718 842 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AP006245.2-201ENST00000522004 300 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AP001922.4-201ENST00000526967 290 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 OR5AZ1P-201ENST00000527448 943 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AC130364.2-201ENST00000528639 604 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 HSPA8P14-201ENST00000552265 1805 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AC011840.5-201ENST00000582125 771 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 MIR4691-201ENST00000583764 85 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AP005432.2-201ENST00000608162 586 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AL049539.1-201ENST00000611964 459 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 MIR6839-201ENST00000620425 113 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AC020763.5-201ENST00000623298 430 ntBASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CLCF1Q9UBD9 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CLCF1Q9UBD9 MAPK10-328ENST00000641553 4009 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 SNORA48.4-201ENST00000391089 134 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 GJA6P-201ENST00000415117 1042 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 GNG5P5-201ENST00000420444 220 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 RPL19P16-201ENST00000433839 588 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 RHOT1P3-201ENST00000436571 331 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 TRY2P-201ENST00000448860 689 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 OR52Y1P-201ENST00000452418 828 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC108161.1-201ENST00000461060 402 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AP001960.1-201ENST00000506494 658 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC025423.2-201ENST00000537570 439 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 MIR4436B2-201ENST00000581415 91 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 MIR4436B1-201ENST00000583272 91 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC010615.3-201ENST00000597319 394 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC006363.1-201ENST00000603806 463 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AL162574.1-201ENST00000615702 950 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AC083843.2-201ENST00000568248 6253 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 AL603750.1-201ENST00000624216 1717 ntBASIC4.58□□□□□ -1.68
CLCF1Q9UBD9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 INTS6P1-201ENST00000504674 2530 ntBASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLCF1Q9UBD9 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms