Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC119674.1-213ENST00000641177 1386 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 RN7SKP184-201ENST00000362348 333 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 RNU6-353P-201ENST00000364266 108 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 snoZ40.1-201ENST00000364540 72 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 MIR191-201ENST00000384873 92 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AL513325.1-201ENST00000417716 1034 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 BTF3P9-201ENST00000418784 283 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC245884.2-201ENST00000426257 404 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 IGBP1P3-201ENST00000447449 1000 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 RPL5P32-201ENST00000454085 879 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 RNU7-140P-201ENST00000459546 60 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 SETP11-201ENST00000473027 690 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC044810.1-201ENST00000480271 711 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 EIF4E2P2-201ENST00000492033 736 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC116353.2-201ENST00000505332 712 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC104090.1-201ENST00000506341 1171 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 SCARNA5-201ENST00000516201 276 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 snoZ278.1-201ENST00000517059 112 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 DUXAP2-201ENST00000519198 589 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 HNRNPCP1-201ENST00000556181 766 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC138207.8-204ENST00000579588 527 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 MTCYBP22-201ENST00000603788 447 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC114477.1-201ENST00000605097 605 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AL109618.2-201ENST00000605527 211 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC090186.1-201ENST00000605991 572 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AP002360.3-201ENST00000607673 710 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC073569.3-201ENST00000619055 682 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC089999.3-201ENST00000622440 577 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AL591135.1-201ENST00000401578 5914 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC027279.1-201ENST00000568885 4284 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 HSPD1P7-201ENST00000447985 1686 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC019072.1-201ENST00000604535 1551 ntBASIC5.72□□□□□ -1.49
SEC61A2Q9H9S3 AC217777.1-201ENST00000570034 1471 ntBASIC5.71□□□□□ -1.49
SEC61A2Q9H9S3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SEC61A2Q9H9S3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SEC61A2Q9H9S3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
SEC61A2Q9H9S3 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SEC61A2Q9H9S3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
SEC61A2Q9H9S3 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC000367.1-201ENST00000452711 1766 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC010132.2-201ENST00000295493 1043 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 Y_RNA.248-201ENST00000364501 109 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 MRPS6P2-201ENST00000381143 370 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 RN7SKP146-201ENST00000410242 334 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 RPL7AP51-201ENST00000422016 760 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 CYCSP52-201ENST00000422857 310 ntBASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.71□□□□□ -1.5
SEC61A2Q9H9S3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms