Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 Y_RNA.194-201ENST00000363985 102 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 RNU1-24P-201ENST00000364285 165 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 RNU2-28P-201ENST00000410457 189 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 PIGPP2-201ENST00000411569 458 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 RPL7P8-201ENST00000411964 730 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 RBMY2KP-201ENST00000418221 992 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 SCP2-206ENST00000430330 938 ntTSL 2 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 NPM1P23-201ENST00000440193 849 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 MTND2P20-201ENST00000440805 661 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 GAPDHP37-201ENST00000442317 968 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 RPL36AP33-201ENST00000450395 310 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 RPS7P10-201ENST00000464254 603 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC112206.1-201ENST00000468416 477 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 RN7SL568P-201ENST00000493069 298 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 RN7SL649P-201ENST00000496974 275 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC112198.1-201ENST00000505369 1220 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC090071.1-201ENST00000507713 644 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 RNY4P37-201ENST00000516225 96 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AP001000.1-201ENST00000526843 742 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC007115.1-201ENST00000546853 234 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC005519.1-201ENST00000554490 601 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 MIR212-201ENST00000586026 110 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 NF1P5-201ENST00000588287 448 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AP001981.2-201ENST00000603241 418 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AL390877.1-201ENST00000605704 214 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC090116.1-201ENST00000615679 446 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 MIR6823-201ENST00000622118 61 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC006328.2-201ENST00000623198 397 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC012005.2-201ENST00000624333 397 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC079228.1-201ENST00000624774 1049 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 SNORA16A-202ENST00000628458 135 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC027559.1-201ENST00000636288 271 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 AC127070.3-201ENST00000503695 3263 ntBASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
TRAIPQ9BWF2 WBP11P1-201ENST00000562560 1931 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 RNU1-85P-201ENST00000364127 164 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 SNORA7A-201ENST00000384765 139 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 FABP12P1-201ENST00000401911 322 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 CYCSP45-201ENST00000402289 315 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 RN7SKP221-201ENST00000410420 301 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 MRPS21P3-201ENST00000436696 262 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 RPL23AP28-201ENST00000448062 470 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 CCDC75P1-201ENST00000469247 791 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 AC079841.1-201ENST00000481228 950 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 RN7SL37P-201ENST00000490461 307 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 AC015524.1-201ENST00000491585 472 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 AC116917.1-201ENST00000520558 305 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 AP003033.2-201ENST00000528901 805 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 AC092851.1-201ENST00000535964 478 ntBASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC7.42□□□□□ -1.22
TRAIPQ9BWF2 AC011500.1-201ENST00000601963 469 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms