Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAD9AQ99638 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RAD9AQ99638 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.66□□□□□ -1.5
RAD9AQ99638 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.66□□□□□ -1.5
RAD9AQ99638 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAD9AQ99638 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAD9AQ99638 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RAD9AQ99638 RPS16P5-201ENST00000406501 404 ntBASIC5.66□□□□□ -1.5
RAD9AQ99638 RNU2-50P-201ENST00000410494 143 ntBASIC5.66□□□□□ -1.5
RAD9AQ99638 RNU2-22P-201ENST00000411266 212 ntBASIC5.66□□□□□ -1.5
RAD9AQ99638 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAD9AQ99638 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.66□□□□□ -1.5
RAD9AQ99638 EI24P4-201ENST00000423683 1078 ntBASIC5.66□□□□□ -1.5
RAD9AQ99638 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.66□□□□□ -1.5
RAD9AQ99638 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.66□□□□□ -1.5
RAD9AQ99638 TPT1P12-201ENST00000448968 492 ntBASIC5.66□□□□□ -1.5
RAD9AQ99638 SNORD125-201ENST00000459538 96 ntBASIC5.66□□□□□ -1.5
RAD9AQ99638 SEPT7P6-201ENST00000469999 1143 ntBASIC5.66□□□□□ -1.5
RAD9AQ99638 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAD9AQ99638 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.66□□□□□ -1.5
RAD9AQ99638 AC140172.1-201ENST00000502928 141 ntBASIC5.66□□□□□ -1.5
RAD9AQ99638 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.66□□□□□ -1.5
RAD9AQ99638 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.66□□□□□ -1.5
RAD9AQ99638 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.66□□□□□ -1.5
RAD9AQ99638 BTF3P13-201ENST00000513224 490 ntBASIC5.66□□□□□ -1.5
RAD9AQ99638 OR7H2P-201ENST00000513483 306 ntBASIC5.66□□□□□ -1.5
RAD9AQ99638 AC097486.1-201ENST00000515331 210 ntBASIC5.66□□□□□ -1.5
RAD9AQ99638 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.66□□□□□ -1.5
RAD9AQ99638 MTND2P17-201ENST00000550281 688 ntBASIC5.66□□□□□ -1.5
RAD9AQ99638 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.66□□□□□ -1.5
RAD9AQ99638 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.66□□□□□ -1.5
RAD9AQ99638 AP000769.2-201ENST00000602344 396 ntBASIC5.66□□□□□ -1.5
RAD9AQ99638 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.66□□□□□ -1.5
RAD9AQ99638 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RAD9AQ99638 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAD9AQ99638 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAD9AQ99638 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAD9AQ99638 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAD9AQ99638 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAD9AQ99638 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAD9AQ99638 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.66□□□□□ -1.5
RAD9AQ99638 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAD9AQ99638 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RAD9AQ99638 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RAD9AQ99638 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RAD9AQ99638 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAD9AQ99638 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAD9AQ99638 SDAD1P1-202ENST00000524156 2051 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 AC011933.2-201ENST00000578539 2790 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAD9AQ99638 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RAD9AQ99638 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.65□□□□□ -1.5
RAD9AQ99638 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RAD9AQ99638 UGT2B24P-201ENST00000514441 1597 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
RAD9AQ99638 RNA5SP453-201ENST00000362503 119 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RAD9AQ99638 AC019050.1-201ENST00000418508 492 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 RPL12P43-201ENST00000420608 499 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 AC009506.2-201ENST00000420635 840 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.65□□□□□ -1.5
RAD9AQ99638 RPL5P2-201ENST00000429598 854 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 RAD1P2-201ENST00000446414 663 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 AL513533.1-201ENST00000453728 415 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 AP000797.2-201ENST00000475768 606 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 RN7SL244P-201ENST00000493405 297 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RAD9AQ99638 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.65□□□□□ -1.5
RAD9AQ99638 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.65□□□□□ -1.5
RAD9AQ99638 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.65□□□□□ -1.5
RAD9AQ99638 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.65□□□□□ -1.5
RAD9AQ99638 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RAD9AQ99638 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.65□□□□□ -1.5
RAD9AQ99638 GMCL1P2-201ENST00000605230 823 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 AL627230.1-201ENST00000613077 211 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 MIR6780A-201ENST00000615089 68 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 AL591926.8-201ENST00000616876 211 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 AC099654.6-201ENST00000636487 512 ntBASIC5.65□□□□□ -1.5
RAD9AQ99638 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.65□□□□□ -1.51
RAD9AQ99638 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RAD9AQ99638 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RAD9AQ99638 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
RAD9AQ99638 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
RAD9AQ99638 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
RAD9AQ99638 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
RAD9AQ99638 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.64□□□□□ -1.51
RAD9AQ99638 CUL4AP1-201ENST00000514750 1863 ntBASIC5.64□□□□□ -1.51
RAD9AQ99638 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RAD9AQ99638 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAD9AQ99638 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAD9AQ99638 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.64□□□□□ -1.51
RAD9AQ99638 AL360270.2-201ENST00000562952 5985 ntBASIC5.64□□□□□ -1.51
RAD9AQ99638 MFSD8-216ENST00000641147 4009 ntBASIC5.64□□□□□ -1.51
RAD9AQ99638 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAD9AQ99638 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RAD9AQ99638 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RAD9AQ99638 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
RAD9AQ99638 RN7SKP113-201ENST00000363891 295 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms