Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AZGP1P2-201ENST00000454506 345 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC015908.1-201ENST00000478739 476 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC037198.2-201ENST00000478845 733 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 RN7SL809P-201ENST00000482040 297 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC083795.1-201ENST00000491760 320 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC093890.1-201ENST00000502554 540 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC027338.1-201ENST00000514840 825 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 SCARNA18.1-201ENST00000516330 83 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 CYCSP22-201ENST00000517555 339 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 FTH1P11-201ENST00000517577 551 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 OR8X1P-201ENST00000534542 869 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 GSTP1P1-201ENST00000548078 319 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 ZNF92P2-201ENST00000600543 1059 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC068768.2-201ENST00000602352 343 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AL096803.3-201ENST00000609032 532 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AL357562.1-201ENST00000624911 609 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AL078621.3-201ENST00000623707 2042 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 MIR550A3-201ENST00000390735 95 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 Z86062.1-201ENST00000406773 777 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 RNGTTP1-201ENST00000420965 728 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 RPL34P3-201ENST00000421454 338 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AL354766.1-201ENST00000423396 542 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 NDUFS5P5-201ENST00000437256 321 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 SUMO2P3-201ENST00000438311 288 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 SDR42E1P3-201ENST00000438345 502 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC069277.2-201ENST00000454211 432 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 RPL12P39-201ENST00000455456 496 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 COPS8P2-201ENST00000473228 627 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 RN7SL727P-201ENST00000482164 296 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 RFPL4AP5-201ENST00000514977 504 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 RNA5SP92-201ENST00000516437 110 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC006518.1-201ENST00000541449 943 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AL512310.9-201ENST00000553311 948 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC093510.2-201ENST00000562820 896 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 SNX6P1-201ENST00000601728 1224 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AL513327.3-201ENST00000602618 469 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 FO393422.1-201ENST00000603908 708 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 KATNBL1P5-201ENST00000605015 517 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AL645933.2-201ENST00000606743 1207 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC005021.1-201ENST00000608730 355 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 RPSAP73-201ENST00000614820 330 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AL356274.1-201ENST00000617064 410 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC006249.1-201ENST00000621223 471 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 AC021106.3-201ENST00000623925 531 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 BTBD10P1-201ENST00000549824 1352 ntBASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.75□□□□□ -1.65
PDLIM3Q53GG5 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms