Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
SHROOM1Q2M3G4 AC009950.2-201ENST00000636548 183 ntBASIC5.97□□□□□ -1.45
SHROOM1Q2M3G4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM1Q2M3G4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM1Q2M3G4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.97□□□□□ -1.45
SHROOM1Q2M3G4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SHROOM1Q2M3G4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SHROOM1Q2M3G4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.96□□□□□ -1.45
SHROOM1Q2M3G4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.96□□□□□ -1.45
SHROOM1Q2M3G4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
SHROOM1Q2M3G4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.96□□□□□ -1.45
SHROOM1Q2M3G4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
SHROOM1Q2M3G4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.96□□□□□ -1.45
SHROOM1Q2M3G4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
SHROOM1Q2M3G4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AL591135.1-201ENST00000401578 5914 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AC092681.1-201ENST00000297369 291 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AC126755.2-208ENST00000327792 462 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AC138969.1-213ENST00000331436 462 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 RN7SKP145-201ENST00000363291 303 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 RNU6-729P-201ENST00000384399 107 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 MIR141-201ENST00000384975 95 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 RNU11-201ENST00000387069 134 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AC021876.1-201ENST00000425959 359 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 RPL12P18-201ENST00000437175 325 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AC011753.3-201ENST00000443436 406 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AC090804.1-201ENST00000448870 490 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 ABCC13-202ENST00000463099 3842 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 RN7SKP260-201ENST00000516907 149 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AL360012.1-201ENST00000602813 131 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AL122125.1-201ENST00000616999 600 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AC005618.4-201ENST00000625053 554 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 AL929601.4-201ENST00000613011 1341 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 MTCO1P46-201ENST00000451639 1491 ntBASIC5.96□□□□□ -1.46
SHROOM1Q2M3G4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 MTND5P23-201ENST00000430812 1655 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AL121839.2-201ENST00000565058 6943 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 RPL10P10-201ENST00000403509 664 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 SNORA77-201ENST00000408716 125 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 MTND4LP21-201ENST00000415303 295 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC138761.5-201ENST00000433967 325 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AL137845.2-201ENST00000444292 988 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 OR52J1P-201ENST00000450596 932 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 RPL5P22-201ENST00000480199 884 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 IMPA1P1-201ENST00000510718 842 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AP002981.1-201ENST00000517692 975 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 PCNPP1-201ENST00000552501 511 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC018552.1-201ENST00000562099 811 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC010547.7-201ENST00000570323 333 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 MIR4737-201ENST00000583979 81 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC025857.2-201ENST00000602711 238 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AL713998.2-201ENST00000604538 1198 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 AC093388.1-201ENST00000609166 430 ntBASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SHROOM1Q2M3G4 MIR6839-201ENST00000620425 113 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms