Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFX7Q2KHR2 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
RFX7Q2KHR2 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.1□□□□□ -1.43
RFX7Q2KHR2 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RFX7Q2KHR2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AP002530.1-201ENST00000405705 684 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AL590139.1-201ENST00000416267 400 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 USP9YP9-201ENST00000429406 715 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 RPL21P133-201ENST00000443666 476 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AC004980.3-201ENST00000447046 365 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 RPS29P33-201ENST00000456717 146 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AC245028.2-201ENST00000458673 253 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AC140172.1-201ENST00000502928 141 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AC010350.1-201ENST00000504908 231 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AC012339.2-201ENST00000523996 453 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AC093524.1-201ENST00000564266 1094 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AL031320.1-201ENST00000604177 357 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 AC104623.2-202ENST00000623477 4002 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.09□□□□□ -1.43
RFX7Q2KHR2 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFX7Q2KHR2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RFX7Q2KHR2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.09□□□□□ -1.44
RFX7Q2KHR2 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
RFX7Q2KHR2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 SNORA66-201ENST00000384792 133 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 AC104333.2-201ENST00000422630 192 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 HMGB1P32-201ENST00000425971 565 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 BX119904.3-201ENST00000428194 957 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 AC008072.1-201ENST00000434254 824 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 AL450023.3-201ENST00000440592 271 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 AC073648.4-201ENST00000442655 781 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 TCEA1P3-201ENST00000443005 880 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 RPL36AP15-201ENST00000444514 266 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 AL691482.1-201ENST00000453255 87 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 OR2A3P-201ENST00000493774 953 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 HNRNPRP2-201ENST00000528421 743 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 CR383656.6-201ENST00000550518 394 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 NMNAT1P1-201ENST00000554095 876 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 AC010503.3-201ENST00000594355 540 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 AC005377.1-201ENST00000605126 456 ntBASIC6.08□□□□□ -1.44
RFX7Q2KHR2 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.08□□□□□ -1.44
RFX7Q2KHR2 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
RFX7Q2KHR2 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RFX7Q2KHR2 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.07□□□□□ -1.44
RFX7Q2KHR2 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.07□□□□□ -1.44
RFX7Q2KHR2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.07□□□□□ -1.44
RFX7Q2KHR2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.07□□□□□ -1.44
RFX7Q2KHR2 RPL35AP21-201ENST00000437667 333 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms