Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 TRIM51GP-201ENST00000534741 1350 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
H3F3AP84243 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
H3F3AP84243 RN7SKP113-201ENST00000363891 295 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 AC007618.1-201ENST00000366455 732 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
H3F3AP84243 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 RN7SKP114-201ENST00000410327 279 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.58□□□□□ -1.68
H3F3AP84243 AC211486.3-201ENST00000412694 621 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 PCNPP4-201ENST00000414817 517 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 DDX39BP1-205ENST00000422507 192 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 COX6CP13-201ENST00000428703 226 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.58□□□□□ -1.68
H3F3AP84243 EEF1B2P5-201ENST00000444820 548 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 AC005532.2-201ENST00000467154 373 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.58□□□□□ -1.68
H3F3AP84243 AC005412.2-201ENST00000492004 341 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 RN7SL441P-201ENST00000492388 296 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.58□□□□□ -1.68
H3F3AP84243 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.58□□□□□ -1.68
H3F3AP84243 LDHBP3-201ENST00000514909 822 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.58□□□□□ -1.68
H3F3AP84243 SCARNA21.2-201ENST00000516600 166 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 AC100784.1-201ENST00000522790 310 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.58□□□□□ -1.68
H3F3AP84243 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.58□□□□□ -1.68
H3F3AP84243 HAUS8P1-201ENST00000549005 542 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.58□□□□□ -1.68
H3F3AP84243 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.58□□□□□ -1.68
H3F3AP84243 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.58□□□□□ -1.68
H3F3AP84243 BNIP3P35-201ENST00000604530 490 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 TAS2R6P-201ENST00000605022 826 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 AC018695.5-201ENST00000605872 315 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
H3F3AP84243 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
H3F3AP84243 LINC01739-205ENST00000641890 573 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
H3F3AP84243 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
H3F3AP84243 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
H3F3AP84243 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.58□□□□□ -1.68
H3F3AP84243 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
H3F3AP84243 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
H3F3AP84243 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.57□□□□□ -1.68
H3F3AP84243 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
H3F3AP84243 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
H3F3AP84243 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
H3F3AP84243 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.57□□□□□ -1.68
H3F3AP84243 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
H3F3AP84243 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
H3F3AP84243 RARSP1-201ENST00000542842 1418 ntBASIC4.57□□□□□ -1.68
H3F3AP84243 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.57□□□□□ -1.68
H3F3AP84243 AL731566.1-201ENST00000620490 1937 ntBASIC4.57□□□□□ -1.68
H3F3AP84243 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
H3F3AP84243 RPL23P2-201ENST00000320371 421 ntBASIC4.57□□□□□ -1.68
H3F3AP84243 U8.4-201ENST00000363626 134 ntBASIC4.57□□□□□ -1.68
H3F3AP84243 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
H3F3AP84243 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.57□□□□□ -1.68
H3F3AP84243 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.57□□□□□ -1.68
H3F3AP84243 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.57□□□□□ -1.68
H3F3AP84243 RNA5SP103-201ENST00000459503 118 ntBASIC4.57□□□□□ -1.68
H3F3AP84243 AC018638.3-201ENST00000461273 132 ntBASIC4.57□□□□□ -1.68
H3F3AP84243 RN7SL799P-201ENST00000475891 298 ntBASIC4.57□□□□□ -1.68
H3F3AP84243 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.57□□□□□ -1.68
H3F3AP84243 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.57□□□□□ -1.68
H3F3AP84243 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.57□□□□□ -1.68
H3F3AP84243 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.57□□□□□ -1.68
H3F3AP84243 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.57□□□□□ -1.68
H3F3AP84243 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.57□□□□□ -1.68
H3F3AP84243 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.57□□□□□ -1.68
H3F3AP84243 AL512310.9-201ENST00000553311 948 ntBASIC4.57□□□□□ -1.68
H3F3AP84243 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.57□□□□□ -1.68
H3F3AP84243 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.57□□□□□ -1.68
H3F3AP84243 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.57□□□□□ -1.68
H3F3AP84243 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.57□□□□□ -1.68
H3F3AP84243 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.57□□□□□ -1.68
H3F3AP84243 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.57□□□□□ -1.68
H3F3AP84243 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
H3F3AP84243 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
H3F3AP84243 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
H3F3AP84243 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
H3F3AP84243 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
H3F3AP84243 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
H3F3AP84243 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
H3F3AP84243 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
H3F3AP84243 AC083843.2-201ENST00000568248 6253 ntBASIC4.57□□□□□ -1.68
H3F3AP84243 MTCO1P46-201ENST00000451639 1491 ntBASIC4.56□□□□□ -1.68
H3F3AP84243 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.56□□□□□ -1.68
H3F3AP84243 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
H3F3AP84243 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
H3F3AP84243 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.56□□□□□ -1.68
H3F3AP84243 THAP12P4-201ENST00000528321 2266 ntBASIC4.56□□□□□ -1.68
H3F3AP84243 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
H3F3AP84243 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.56□□□□□ -1.68
H3F3AP84243 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
H3F3AP84243 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
H3F3AP84243 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
H3F3AP84243 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
H3F3AP84243 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms