Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL390119.1-201ENST00000440329 312 ntBASIC5.59□□□□□ -1.51
TPM4P67936 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.59□□□□□ -1.51
TPM4P67936 OTX2P1-201ENST00000450956 354 ntBASIC5.59□□□□□ -1.51
TPM4P67936 RPL7P45-201ENST00000455851 743 ntBASIC5.59□□□□□ -1.51
TPM4P67936 Z92846.1-201ENST00000456203 268 ntBASIC5.59□□□□□ -1.51
TPM4P67936 RPL9P15-201ENST00000491096 532 ntBASIC5.59□□□□□ -1.51
TPM4P67936 AC092349.1-201ENST00000504903 310 ntBASIC5.59□□□□□ -1.51
TPM4P67936 RPS4XP20-201ENST00000505751 772 ntBASIC5.59□□□□□ -1.51
TPM4P67936 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.59□□□□□ -1.51
TPM4P67936 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.59□□□□□ -1.51
TPM4P67936 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.59□□□□□ -1.51
TPM4P67936 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.59□□□□□ -1.51
TPM4P67936 RNF138P2-201ENST00000603490 592 ntBASIC5.59□□□□□ -1.51
TPM4P67936 AC108865.2-201ENST00000606881 432 ntBASIC5.59□□□□□ -1.51
TPM4P67936 MIR8080-201ENST00000622224 89 ntBASIC5.59□□□□□ -1.51
TPM4P67936 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.59□□□□□ -1.51
TPM4P67936 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.59□□□□□ -1.51
TPM4P67936 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TPM4P67936 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TPM4P67936 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.59□□□□□ -1.51
TPM4P67936 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.59□□□□□ -1.51
TPM4P67936 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TPM4P67936 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TPM4P67936 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TPM4P67936 DDX18P4-201ENST00000511690 1966 ntBASIC5.58□□□□□ -1.52
TPM4P67936 MTCO1P46-201ENST00000451639 1491 ntBASIC5.58□□□□□ -1.52
TPM4P67936 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.58□□□□□ -1.52
TPM4P67936 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TPM4P67936 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TPM4P67936 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TPM4P67936 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TPM4P67936 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.58□□□□□ -1.52
TPM4P67936 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TPM4P67936 LRRC37BP1-201ENST00000398851 714 ntBASIC5.58□□□□□ -1.52
TPM4P67936 NUDT19P3-201ENST00000404698 555 ntBASIC5.58□□□□□ -1.52
TPM4P67936 AC002524.1-201ENST00000411687 547 ntBASIC5.58□□□□□ -1.52
TPM4P67936 CKS1BP6-201ENST00000424932 240 ntBASIC5.58□□□□□ -1.52
TPM4P67936 AC093655.2-201ENST00000425735 631 ntBASIC5.58□□□□□ -1.52
TPM4P67936 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.58□□□□□ -1.52
TPM4P67936 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.58□□□□□ -1.52
TPM4P67936 AL691482.1-201ENST00000453255 87 ntBASIC5.58□□□□□ -1.52
TPM4P67936 RANP1-206ENST00000455094 651 ntBASIC5.58□□□□□ -1.52
TPM4P67936 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TPM4P67936 AL445433.1-201ENST00000457507 257 ntBASIC5.58□□□□□ -1.52
TPM4P67936 RN7SL170P-201ENST00000487098 295 ntBASIC5.58□□□□□ -1.52
TPM4P67936 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.58□□□□□ -1.52
TPM4P67936 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.58□□□□□ -1.52
TPM4P67936 RPEP1-201ENST00000504507 658 ntBASIC5.58□□□□□ -1.52
TPM4P67936 AC074087.1-201ENST00000512059 724 ntBASIC5.58□□□□□ -1.52
TPM4P67936 AL671862.1-201ENST00000515851 349 ntBASIC5.58□□□□□ -1.52
TPM4P67936 RNU6-941P-201ENST00000516346 108 ntBASIC5.58□□□□□ -1.52
TPM4P67936 AC112191.2-201ENST00000522428 333 ntBASIC5.58□□□□□ -1.52
TPM4P67936 TOMM20P1-201ENST00000534518 427 ntBASIC5.58□□□□□ -1.52
TPM4P67936 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.58□□□□□ -1.52
TPM4P67936 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.58□□□□□ -1.52
TPM4P67936 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.58□□□□□ -1.52
TPM4P67936 AC233280.2-201ENST00000603917 1070 ntBASIC5.58□□□□□ -1.52
TPM4P67936 AP005432.2-201ENST00000608162 586 ntBASIC5.58□□□□□ -1.52
TPM4P67936 OR7M1P-201ENST00000608946 533 ntBASIC5.58□□□□□ -1.52
TPM4P67936 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.58□□□□□ -1.52
TPM4P67936 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.58□□□□□ -1.52
TPM4P67936 AL691477.1-201ENST00000624398 162 ntBASIC5.58□□□□□ -1.52
TPM4P67936 CYP4F35P-202ENST00000636121 390 ntBASIC5.58□□□□□ -1.52
TPM4P67936 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TPM4P67936 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TPM4P67936 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TPM4P67936 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TPM4P67936 AC120338.1-201ENST00000625074 1541 ntBASIC5.58□□□□□ -1.52
TPM4P67936 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TPM4P67936 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TPM4P67936 MAPK10-303ENST00000641324 3959 ntBASIC5.57□□□□□ -1.52
TPM4P67936 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.57□□□□□ -1.52
TPM4P67936 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TPM4P67936 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TPM4P67936 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.57□□□□□ -1.52
TPM4P67936 MIR1182-201ENST00000408363 97 ntBASIC5.57□□□□□ -1.52
TPM4P67936 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.57□□□□□ -1.52
TPM4P67936 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.57□□□□□ -1.52
TPM4P67936 RNU2-18P-201ENST00000411224 162 ntBASIC5.57□□□□□ -1.52
TPM4P67936 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.57□□□□□ -1.52
TPM4P67936 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.57□□□□□ -1.52
TPM4P67936 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.57□□□□□ -1.52
TPM4P67936 AC115283.1-201ENST00000427353 400 ntBASIC5.57□□□□□ -1.52
TPM4P67936 CYCSP6-201ENST00000434498 302 ntBASIC5.57□□□□□ -1.52
TPM4P67936 AC073052.1-201ENST00000440417 714 ntBASIC5.57□□□□□ -1.52
TPM4P67936 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.57□□□□□ -1.52
TPM4P67936 AC073587.1-201ENST00000447093 876 ntBASIC5.57□□□□□ -1.52
TPM4P67936 RN7SL799P-201ENST00000475891 298 ntBASIC5.57□□□□□ -1.52
TPM4P67936 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.57□□□□□ -1.52
TPM4P67936 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.57□□□□□ -1.52
TPM4P67936 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.57□□□□□ -1.52
TPM4P67936 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms