Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 PRPF38AP2-201ENST00000438179 851 ntBASIC5.7□□□□□ -1.5
VCPP55072 MTCYBP21-201ENST00000443300 1113 ntBASIC5.7□□□□□ -1.5
VCPP55072 RPL31P44-201ENST00000447680 377 ntBASIC5.7□□□□□ -1.5
VCPP55072 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.7□□□□□ -1.5
VCPP55072 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.7□□□□□ -1.5
VCPP55072 snoU13.20-201ENST00000459180 104 ntBASIC5.7□□□□□ -1.5
VCPP55072 MORF4L2P1-201ENST00000503761 858 ntBASIC5.7□□□□□ -1.5
VCPP55072 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VCPP55072 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.7□□□□□ -1.5
VCPP55072 AC138832.1-201ENST00000522871 556 ntBASIC5.7□□□□□ -1.5
VCPP55072 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.7□□□□□ -1.5
VCPP55072 AP000859.1-201ENST00000525536 307 ntBASIC5.7□□□□□ -1.5
VCPP55072 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.7□□□□□ -1.5
VCPP55072 AC005000.1-201ENST00000536192 288 ntBASIC5.7□□□□□ -1.5
VCPP55072 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.7□□□□□ -1.5
VCPP55072 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.7□□□□□ -1.5
VCPP55072 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.7□□□□□ -1.5
VCPP55072 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VCPP55072 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.7□□□□□ -1.5
VCPP55072 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
VCPP55072 RBM22P1-201ENST00000578589 1214 ntBASIC5.7□□□□□ -1.5
VCPP55072 AC005084.1-201ENST00000605160 304 ntBASIC5.7□□□□□ -1.5
VCPP55072 MIR6758-201ENST00000620653 63 ntBASIC5.7□□□□□ -1.5
VCPP55072 uc_338.7-201ENST00000621834 124 ntBASIC5.7□□□□□ -1.5
VCPP55072 AC012414.7-202ENST00000622705 1090 ntBASIC5.7□□□□□ -1.5
VCPP55072 AC016717.3-201ENST00000624730 554 ntBASIC5.7□□□□□ -1.5
VCPP55072 AL360270.2-201ENST00000562952 5985 ntBASIC5.7□□□□□ -1.5
VCPP55072 AL513548.1-201ENST00000562904 1724 ntBASIC5.7□□□□□ -1.5
VCPP55072 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VCPP55072 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VCPP55072 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VCPP55072 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
VCPP55072 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
VCPP55072 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VCPP55072 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VCPP55072 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VCPP55072 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VCPP55072 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.69□□□□□ -1.5
VCPP55072 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VCPP55072 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VCPP55072 TCP11X1-202ENST00000622971 1372 ntBASIC5.69□□□□□ -1.5
VCPP55072 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
VCPP55072 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.69□□□□□ -1.5
VCPP55072 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
VCPP55072 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.69□□□□□ -1.5
VCPP55072 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VCPP55072 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VCPP55072 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VCPP55072 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VCPP55072 RPS16P5-201ENST00000406501 404 ntBASIC5.69□□□□□ -1.5
VCPP55072 AL590139.1-201ENST00000416267 400 ntBASIC5.69□□□□□ -1.5
VCPP55072 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.69□□□□□ -1.5
VCPP55072 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.69□□□□□ -1.5
VCPP55072 AC096741.1-201ENST00000472250 846 ntBASIC5.69□□□□□ -1.5
VCPP55072 AC021193.1-201ENST00000511607 420 ntBASIC5.69□□□□□ -1.5
VCPP55072 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.69□□□□□ -1.5
VCPP55072 C1GALT1P3-201ENST00000522049 819 ntBASIC5.69□□□□□ -1.5
VCPP55072 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VCPP55072 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.69□□□□□ -1.5
VCPP55072 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.69□□□□□ -1.5
VCPP55072 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.69□□□□□ -1.5
VCPP55072 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VCPP55072 MIR1254-2-201ENST00000579553 63 ntBASIC5.69□□□□□ -1.5
VCPP55072 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.69□□□□□ -1.5
VCPP55072 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.69□□□□□ -1.5
VCPP55072 AC068790.4-201ENST00000602474 263 ntBASIC5.69□□□□□ -1.5
VCPP55072 AL161912.3-201ENST00000605404 628 ntBASIC5.69□□□□□ -1.5
VCPP55072 WBP1LP8-201ENST00000617401 327 ntBASIC5.69□□□□□ -1.5
VCPP55072 AC015660.5-201ENST00000623238 564 ntBASIC5.69□□□□□ -1.5
VCPP55072 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.69□□□□□ -1.5
VCPP55072 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VCPP55072 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VCPP55072 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VCPP55072 AC002525.1-201ENST00000624392 1622 ntBASIC5.69□□□□□ -1.5
VCPP55072 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VCPP55072 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
VCPP55072 CR382285.2-201ENST00000624662 1495 ntBASIC5.69□□□□□ -1.5
VCPP55072 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.69□□□□□ -1.5
VCPP55072 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.69□□□□□ -1.5
VCPP55072 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VCPP55072 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.68□□□□□ -1.5
VCPP55072 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
VCPP55072 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VCPP55072 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VCPP55072 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VCPP55072 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VCPP55072 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VCPP55072 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VCPP55072 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VCPP55072 MIR133B-201ENST00000362210 119 ntBASIC5.68□□□□□ -1.5
VCPP55072 CHMP1B2P-201ENST00000399581 597 ntBASIC5.68□□□□□ -1.5
VCPP55072 AL589994.1-201ENST00000404962 340 ntBASIC5.68□□□□□ -1.5
VCPP55072 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.68□□□□□ -1.5
VCPP55072 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.68□□□□□ -1.5
VCPP55072 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.68□□□□□ -1.5
VCPP55072 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.68□□□□□ -1.5
VCPP55072 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.68□□□□□ -1.5
VCPP55072 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.68□□□□□ -1.5
VCPP55072 RNU6-941P-201ENST00000516346 108 ntBASIC5.68□□□□□ -1.5
VCPP55072 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms