Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.91□□□□□ -1.46
COPAP53621 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.91□□□□□ -1.46
COPAP53621 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.91□□□□□ -1.46
COPAP53621 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.91□□□□□ -1.46
COPAP53621 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.91□□□□□ -1.46
COPAP53621 AC087888.1-201ENST00000550884 1254 ntBASIC5.91□□□□□ -1.46
COPAP53621 AC104229.1-201ENST00000561364 255 ntBASIC5.91□□□□□ -1.46
COPAP53621 AGGF1P9-201ENST00000561884 913 ntBASIC5.91□□□□□ -1.46
COPAP53621 GARSP1-201ENST00000570895 719 ntBASIC5.91□□□□□ -1.46
COPAP53621 AC084373.1-201ENST00000603311 235 ntBASIC5.91□□□□□ -1.46
COPAP53621 AL121890.2-201ENST00000617644 465 ntBASIC5.91□□□□□ -1.46
COPAP53621 AP001005.3-201ENST00000622049 129 ntBASIC5.91□□□□□ -1.46
COPAP53621 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COPAP53621 AC093875.1-201ENST00000623688 504 ntBASIC5.91□□□□□ -1.46
COPAP53621 AC087565.3-203ENST00000641018 837 ntBASIC5.91□□□□□ -1.46
COPAP53621 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COPAP53621 AC008432.1-201ENST00000615912 1320 ntBASIC5.91□□□□□ -1.46
COPAP53621 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COPAP53621 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COPAP53621 MRRFP1-201ENST00000435941 1675 ntBASIC5.91□□□□□ -1.46
COPAP53621 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.91□□□□□ -1.46
COPAP53621 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
COPAP53621 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COPAP53621 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
COPAP53621 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COPAP53621 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COPAP53621 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.9□□□□□ -1.46
COPAP53621 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COPAP53621 AC109446.4-201ENST00000623235 2755 ntBASIC5.9□□□□□ -1.46
COPAP53621 BCORP1-203ENST00000513194 5093 ntBASIC5.9□□□□□ -1.46
COPAP53621 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
COPAP53621 CR788268.1-201ENST00000603931 1809 ntBASIC5.9□□□□□ -1.46
COPAP53621 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COPAP53621 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.9□□□□□ -1.46
COPAP53621 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.9□□□□□ -1.46
COPAP53621 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COPAP53621 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COPAP53621 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
COPAP53621 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COPAP53621 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
COPAP53621 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COPAP53621 MIR133A2-201ENST00000347538 102 ntBASIC5.9□□□□□ -1.46
COPAP53621 RNU6-354P-201ENST00000383862 107 ntBASIC5.9□□□□□ -1.46
COPAP53621 RNU6-610P-201ENST00000384264 107 ntBASIC5.9□□□□□ -1.46
COPAP53621 AL355615.1-201ENST00000406187 641 ntBASIC5.9□□□□□ -1.46
COPAP53621 OR2AT2P-201ENST00000413438 905 ntBASIC5.9□□□□□ -1.46
COPAP53621 XKRYP4-201ENST00000414395 483 ntBASIC5.9□□□□□ -1.46
COPAP53621 AL596448.1-201ENST00000415024 392 ntBASIC5.9□□□□□ -1.46
COPAP53621 METTL15P3-201ENST00000415522 1221 ntBASIC5.9□□□□□ -1.46
COPAP53621 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.9□□□□□ -1.46
COPAP53621 BMS1P13-201ENST00000417301 885 ntBASIC5.9□□□□□ -1.46
COPAP53621 GNG5P5-201ENST00000420444 220 ntBASIC5.9□□□□□ -1.46
COPAP53621 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.9□□□□□ -1.46
COPAP53621 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.9□□□□□ -1.46
COPAP53621 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COPAP53621 RPL12P18-201ENST00000437175 325 ntBASIC5.9□□□□□ -1.46
COPAP53621 MTCYBP12-201ENST00000440559 1134 ntBASIC5.9□□□□□ -1.46
COPAP53621 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.9□□□□□ -1.46
COPAP53621 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.9□□□□□ -1.46
COPAP53621 XKRYP5-201ENST00000449659 483 ntBASIC5.9□□□□□ -1.46
COPAP53621 HMGB1P26-201ENST00000452520 628 ntBASIC5.9□□□□□ -1.46
COPAP53621 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.9□□□□□ -1.46
COPAP53621 AC110749.1-201ENST00000462007 357 ntBASIC5.9□□□□□ -1.46
COPAP53621 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
COPAP53621 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.46
COPAP53621 AC079080.1-201ENST00000479841 822 ntBASIC5.9□□□□□ -1.46
COPAP53621 RN7SL629P-201ENST00000489622 285 ntBASIC5.9□□□□□ -1.46
COPAP53621 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.9□□□□□ -1.46
COPAP53621 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.9□□□□□ -1.46
COPAP53621 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.9□□□□□ -1.46
COPAP53621 OR7E13P-201ENST00000526052 910 ntBASIC5.9□□□□□ -1.46
COPAP53621 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.9□□□□□ -1.46
COPAP53621 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.9□□□□□ -1.46
COPAP53621 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COPAP53621 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.9□□□□□ -1.46
COPAP53621 AC008507.2-201ENST00000588402 1176 ntBASIC5.9□□□□□ -1.46
COPAP53621 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.9□□□□□ -1.46
COPAP53621 AL445670.1-201ENST00000618889 801 ntBASIC5.9□□□□□ -1.46
COPAP53621 AL691477.1-201ENST00000624398 162 ntBASIC5.9□□□□□ -1.46
COPAP53621 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.9□□□□□ -1.46
COPAP53621 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COPAP53621 AL158152.1-201ENST00000602652 1435 ntBASIC5.9□□□□□ -1.47
COPAP53621 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.9□□□□□ -1.47
COPAP53621 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COPAP53621 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.9□□□□□ -1.47
COPAP53621 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
COPAP53621 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.89□□□□□ -1.47
COPAP53621 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COPAP53621 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
COPAP53621 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
COPAP53621 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COPAP53621 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COPAP53621 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COPAP53621 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COPAP53621 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COPAP53621 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
COPAP53621 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COPAP53621 RN7SKP160-201ENST00000363804 340 ntBASIC5.89□□□□□ -1.47
COPAP53621 RNU6-481P-201ENST00000384194 107 ntBASIC5.89□□□□□ -1.47
COPAP53621 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms