Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.56□□□□□ -1.68
CX3CR1P49238 HSPE1P22-201ENST00000456856 327 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 AL133445.1-201ENST00000467051 452 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.56□□□□□ -1.68
CX3CR1P49238 AC090568.1-201ENST00000509499 856 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 MTATP6P1-201ENST00000514057 681 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CR1P49238 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CR1P49238 HNRNPRP2-201ENST00000528421 743 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 BNIP3P1-201ENST00000547295 580 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.56□□□□□ -1.68
CX3CR1P49238 MTND2P13-201ENST00000577438 1039 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.56□□□□□ -1.68
CX3CR1P49238 AP005262.1-201ENST00000582646 997 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 RN7SL435P-201ENST00000584418 282 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CX3CR1P49238 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.56□□□□□ -1.68
CX3CR1P49238 AC006272.2-201ENST00000594725 163 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 AC005840.5-201ENST00000619166 599 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CR1P49238 AC087821.1-201ENST00000623639 567 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CX3CR1P49238 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CX3CR1P49238 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CR1P49238 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CR1P49238 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CR1P49238 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CX3CR1P49238 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CR1P49238 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CR1P49238 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.55□□□□□ -1.68
CX3CR1P49238 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CR1P49238 HSPA8P17-201ENST00000427029 1382 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CR1P49238 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CX3CR1P49238 SCARNA15-201ENST00000607520 4325 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CR1P49238 PCAT14-202ENST00000627127 3935 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CR1P49238 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.55□□□□□ -1.68
CX3CR1P49238 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CR1P49238 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CR1P49238 RNU1-74P-201ENST00000384108 171 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CX3CR1P49238 AC104297.1-201ENST00000393779 870 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 RPL5P19-201ENST00000404228 893 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 AL390316.1-201ENST00000406279 553 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 AL390774.1-201ENST00000411924 246 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CR1P49238 SETP15-201ENST00000412724 337 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.55□□□□□ -1.68
CX3CR1P49238 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CR1P49238 AC002069.1-201ENST00000429649 1159 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.55□□□□□ -1.68
CX3CR1P49238 CYCSP12-201ENST00000437729 300 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 RPS29P10-201ENST00000439197 166 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CR1P49238 RPS27AP2-201ENST00000457576 465 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CR1P49238 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.55□□□□□ -1.68
CX3CR1P49238 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.55□□□□□ -1.68
CX3CR1P49238 RNU6-941P-201ENST00000516346 108 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 RNA5SP373-201ENST00000517271 95 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CR1P49238 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CR1P49238 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.55□□□□□ -1.68
CX3CR1P49238 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.55□□□□□ -1.68
CX3CR1P49238 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.55□□□□□ -1.68
CX3CR1P49238 BNIP3P35-201ENST00000604530 490 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 AC004241.3-201ENST00000611728 517 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 WBP1LP8-201ENST00000617401 327 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 AC118658.2-201ENST00000618697 459 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 AP000648.2-201ENST00000624182 404 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 CYP4F35P-202ENST00000636121 390 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 OR8A1-204ENST00000642111 1145 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 AC011447.7-201ENST00000624228 1590 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.55□□□□□ -1.68
CX3CR1P49238 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.55□□□□□ -1.68
CX3CR1P49238 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CR1P49238 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CX3CR1P49238 OR55B1P-203ENST00000641518 2602 ntBASIC4.55□□□□□ -1.68
CX3CR1P49238 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CX3CR1P49238 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CR1P49238 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CR1P49238 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CR1P49238 STX3-208ENST00000641815 3236 ntBASIC4.54□□□□□ -1.68
CX3CR1P49238 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CR1P49238 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CR1P49238 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CR1P49238 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CR1P49238 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CX3CR1P49238 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CX3CR1P49238 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CX3CR1P49238 SNORA17A-201ENST00000391185 133 ntBASIC4.54□□□□□ -1.68
CX3CR1P49238 AL359643.1-201ENST00000404109 423 ntBASIC4.54□□□□□ -1.68
CX3CR1P49238 RN7SKP97-201ENST00000410966 333 ntBASIC4.54□□□□□ -1.68
CX3CR1P49238 RN7SKP293-201ENST00000411389 296 ntBASIC4.54□□□□□ -1.68
CX3CR1P49238 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.54□□□□□ -1.68
CX3CR1P49238 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.54□□□□□ -1.68
CX3CR1P49238 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.54□□□□□ -1.68
CX3CR1P49238 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms