Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL12P48061 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CXCL12P48061 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CXCL12P48061 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCL12P48061 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL12P48061 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CXCL12P48061 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCL12P48061 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL12P48061 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL12P48061 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL12P48061 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
CXCL12P48061 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CXCL12P48061 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.07□□□□□ -1.6
CXCL12P48061 AL359955.1-201ENST00000455242 3275 ntBASIC5.07□□□□□ -1.6
CXCL12P48061 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CXCL12P48061 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL12P48061 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL12P48061 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL12P48061 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL12P48061 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CXCL12P48061 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL12P48061 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.07□□□□□ -1.6
CXCL12P48061 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.07□□□□□ -1.6
CXCL12P48061 SLC25A18P1-201ENST00000449385 454 ntBASIC5.07□□□□□ -1.6
CXCL12P48061 TCEA1P1-201ENST00000449716 880 ntBASIC5.07□□□□□ -1.6
CXCL12P48061 AL161747.1-201ENST00000480068 358 ntBASIC5.07□□□□□ -1.6
CXCL12P48061 RPS24P16-201ENST00000497294 392 ntBASIC5.07□□□□□ -1.6
CXCL12P48061 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL12P48061 ENPP7P9-201ENST00000514456 627 ntBASIC5.07□□□□□ -1.6
CXCL12P48061 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL12P48061 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL12P48061 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.07□□□□□ -1.6
CXCL12P48061 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL12P48061 HMGN2P47-201ENST00000559378 272 ntBASIC5.07□□□□□ -1.6
CXCL12P48061 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL12P48061 AC023389.2-201ENST00000580031 955 ntBASIC5.07□□□□□ -1.6
CXCL12P48061 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCL12P48061 AP000919.1-201ENST00000582850 985 ntBASIC5.07□□□□□ -1.6
CXCL12P48061 AC020915.5-201ENST00000596836 964 ntBASIC5.07□□□□□ -1.6
CXCL12P48061 AC125494.2-201ENST00000602431 657 ntBASIC5.07□□□□□ -1.6
CXCL12P48061 AC020910.3-201ENST00000603701 874 ntBASIC5.07□□□□□ -1.6
CXCL12P48061 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.07□□□□□ -1.6
CXCL12P48061 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCL12P48061 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.07□□□□□ -1.6
CXCL12P48061 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CXCL12P48061 AC005225.5-201ENST00000623547 2225 ntBASIC5.07□□□□□ -1.6
CXCL12P48061 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CXCL12P48061 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL12P48061 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL12P48061 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL12P48061 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL12P48061 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CXCL12P48061 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL12P48061 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.06□□□□□ -1.6
CXCL12P48061 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL12P48061 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.06□□□□□ -1.6
CXCL12P48061 RN7SKP227-201ENST00000364445 330 ntBASIC5.06□□□□□ -1.6
CXCL12P48061 MIR589-201ENST00000385238 99 ntBASIC5.06□□□□□ -1.6
CXCL12P48061 RPS26P38-201ENST00000414476 348 ntBASIC5.06□□□□□ -1.6
CXCL12P48061 RPL17P36-201ENST00000420302 549 ntBASIC5.06□□□□□ -1.6
CXCL12P48061 RPS27AP7-201ENST00000422792 455 ntBASIC5.06□□□□□ -1.6
CXCL12P48061 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.06□□□□□ -1.6
CXCL12P48061 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL12P48061 NRBF2P3-201ENST00000432731 865 ntBASIC5.06□□□□□ -1.6
CXCL12P48061 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.06□□□□□ -1.6
CXCL12P48061 AC093827.1-201ENST00000480094 861 ntBASIC5.06□□□□□ -1.6
CXCL12P48061 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.06□□□□□ -1.6
CXCL12P48061 HMGN1P9-201ENST00000515212 298 ntBASIC5.06□□□□□ -1.6
CXCL12P48061 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.06□□□□□ -1.6
CXCL12P48061 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.06□□□□□ -1.6
CXCL12P48061 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.06□□□□□ -1.6
CXCL12P48061 AC079064.1-201ENST00000528365 362 ntBASIC5.06□□□□□ -1.6
CXCL12P48061 AL110118.1-201ENST00000553543 400 ntBASIC5.06□□□□□ -1.6
CXCL12P48061 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.06□□□□□ -1.6
CXCL12P48061 MIR4675-201ENST00000577898 77 ntBASIC5.06□□□□□ -1.6
CXCL12P48061 MIR4277-201ENST00000578298 84 ntBASIC5.06□□□□□ -1.6
CXCL12P48061 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.06□□□□□ -1.6
CXCL12P48061 AL445423.1-201ENST00000609941 536 ntBASIC5.06□□□□□ -1.6
CXCL12P48061 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL12P48061 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CXCL12P48061 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CXCL12P48061 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.06□□□□□ -1.6
CXCL12P48061 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.06□□□□□ -1.6
CXCL12P48061 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
CXCL12P48061 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL12P48061 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.05□□□□□ -1.6
CXCL12P48061 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL12P48061 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL12P48061 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL12P48061 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL12P48061 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.05□□□□□ -1.6
CXCL12P48061 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL12P48061 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CXCL12P48061 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CXCL12P48061 OR4K15-201ENST00000305051 1216 ntBASIC5.05□□□□□ -1.6
CXCL12P48061 BX510359.2-201ENST00000417920 305 ntBASIC5.05□□□□□ -1.6
CXCL12P48061 AC017019.1-201ENST00000426129 261 ntBASIC5.05□□□□□ -1.6
CXCL12P48061 RSL24D1P6-201ENST00000426934 401 ntBASIC5.05□□□□□ -1.6
CXCL12P48061 CR383656.1-201ENST00000484916 377 ntBASIC5.05□□□□□ -1.6
CXCL12P48061 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms